RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 CXCL2P19875 107 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 CDKN2CP42773 168 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 NPBWR1P48145 328 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 LIMK2P53671 638 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 GABREP78334 506 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 SIM1P81133 766 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 GTF2BQ00403 316 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 BCL2L1Q07817 233 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 GPR176Q14439 515 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 INSL4Q14641 139 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 SURF2Q15527 256 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 NHLRC3Q5JS37 347 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 DMRTA1Q5VZB9 504 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 SFRP4Q6FHJ7 346 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ZNF574Q6ZN55 896 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 VTCN1Q7Z7D3 282 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 UBA3Q8TBC4 463 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ARNTL2Q8WYA1 636 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 IP6K1Q92551 441 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 KCTD12Q96CX2 325 aaKnown RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 C14orf79Q96F83 325 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 PDLIM5Q96HC4 596 aaKnown RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 TPD52L3Q96J77 140 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 C5orf34Q96MH7 638 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 CPEB1Q9BZB8 566 aaKnown RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ACSS1Q9NUB1 689 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 TDP1Q9NUW8 608 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 PTCH2Q9Y6C5 1203 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ERCC6L2Q5T890 1561 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 MEX3AA1L020 520 aaKnown RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 A6NNC1 897 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 MBPP02686 304 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 S100A8P05109 93 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ANXA2P07355 339 aaKnown RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ADRA2AP08913 450 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 SLC35E2BP0CK96 405 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 HLA-EP13747 358 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ACHEP22303 614 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 FEN1P39748 380 aaKnown RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ETV6P41212 452 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 CLDN20P56880 219 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 CDK6Q00534 326 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ATXN7L3Q14CW9 347 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 SLC5A12Q1EHB4 618 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 DUOXA2Q1HG44 320 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ZNF772Q68DY9 489 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 H3F3CQ6NXT2 135 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 HSDL2Q6YN16 418 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 RNF165Q6ZSG1 346 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 TTLL10Q6ZVT0 673 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 DPPA4Q7L190 304 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ANKRD46Q86W74 232 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 KLBQ86Z14 1044 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 RIMKLAQ8IXN7 391 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 DAW1Q8N136 415 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 BLOC1S5Q8TDH9 187 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 CREB3L4Q8TEY5 395 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ACCSQ96QU6 501 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ZIC5Q96T25 663 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 CPNE1Q99829 537 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ACTL8Q9H568 366 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 APOBEC3GQ9HC16 384 aaKnown RBP6.56□□□□□ -1.36
CNOT4-205ENST00000423368 SARDHQ9UL12 918 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 PCDHB7Q9Y5E2 793 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 ATRNO75882 1429 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 PREX2Q70Z35 1606 aa6.56□□□□□ -1.36
CNOT4-205ENST00000423368 CASKO14936 926 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 EIF3DO15371 548 aaKnown RBP eCLIP6.55□□□□□ -1.36
CNOT4-205ENST00000423368 APBB3O95704 486 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 TFP02787 698 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 HPXP02790 462 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 RPS17P08708 135 aaKnown RBP6.55□□□□□ -1.36
CNOT4-205ENST00000423368 NPSP0C0P6 89 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 EBLN1P0CF75 366 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 DAOP14920 347 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 PSMA1P25786 263 aaKnown RBP6.55□□□□□ -1.36
CNOT4-205ENST00000423368 CLCN5P51795 746 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 CCL23P55773 120 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 GAMTQ14353 236 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 NTRK2Q16620 822 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 PTPRNQ16849 979 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 PCID2Q5JVF3 399 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 NXPE4Q6UWF7 544 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 CYHR1Q6ZMK1 362 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 TPGS1Q6ZTW0 290 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 C10orf71Q711Q0 1435 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 SHFQ7M4L6 423 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 STK40Q8N2I9 435 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 SVOPLQ8N434 492 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 MINDY1Q8N5J2 469 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 OR2L5Q8NG80 312 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 ZCCHC10Q8TBK6 192 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 HTR3CQ8WXA8 447 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 ACOT11Q8WXI4 607 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-205ENST00000423368 C11orf24Q96F05 449 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-205ENST00000423368 ZPBPQ9BS86 351 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 IKZF5Q9H5V7 419 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 BRD9Q9H8M2 597 aa6.55□□□□□ -1.36
CNOT4-205ENST00000423368 TREM1Q9NP99 234 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms