RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 LSM3P62310 102 aaKnown RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ACTC1P68032 377 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ACTA1P68133 377 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF648Q5T619 568 aaPredicted RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 FAM131AQ6UXB0 335 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PIANPQ8IYJ0 282 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 CDRT4Q8N9R6 151 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ATOH8Q96SQ7 321 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 CMKLR1Q99788 373 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 SLC39A3Q9BRY0 314 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ACTRT3Q9BYD9 372 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ANKRA2Q9H9E1 313 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 TRNAU1APQ9NX07 287 aaKnown RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 SATB2Q9UPW6 733 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 A8MUA0 341 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PCDHGA12O60330 932 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 SRPX2O60687 465 aaPredicted RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 IGHEP01854 428 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 HLA-DPB1P04440 258 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 F7P08709 466 aaPredicted RBP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 P2RY2P41231 377 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PSPHP78330 225 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 POU4F2Q12837 409 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 IRF4Q15306 451 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 BCL7AQ4VC05 210 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 KRT77Q7Z794 578 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 CARM1Q86X55 608 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 TREML1Q86YW5 311 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 LRRC17Q8N6Y2 441 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 SFXN5Q8TD22 340 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 HAVCR2Q8TDQ0 301 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 NAT14Q8WUY8 206 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PKP2Q99959 881 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 SMOXQ9NWM0 555 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 ACTR10Q9NZ32 417 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 UPB1Q9UBR1 384 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 TNFRSF10CO14798 259 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 IFNA6P05013 189 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 F3P13726 295 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 CKMT2P17540 419 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PPP1R3AQ16821 1122 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 KCTD21Q4G0X4 260 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PSMA8Q8TAA3 256 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 FAM110BQ8TC76 370 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PMEPA1Q969W9 287 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 PTERQ96BW5 349 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 UBXN10Q96LJ8 280 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 LPAR4Q99677 370 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 DMRT3Q9NQL9 472 aa11.44□□□□□ -0.58
PTPRF-205ENST00000414879 GREB1LQ9C091 1923 aaPredicted RBP11.43□□□□□ -0.58
PTPRF-205ENST00000414879 RORCP51449 518 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF77Q15935 545 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 PDSS2Q86YH6 399 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 ISL2Q96A47 359 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 IL17FQ96PD4 163 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 TMEM14AQ9Y6G1 99 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 PRSS38A1L453 326 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 ANXA2P2A6NMY6 339 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 CSTAP01040 98 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 OPN1SWP03999 348 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 ANXA2P07355 339 aaKnown RBP11.43□□□□□ -0.58
PTPRF-205ENST00000414879 DDCP20711 480 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 F8A1P23610 371 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 GRIN2CQ14957 1233 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 TIGD6Q17RP2 521 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 TDHQ8IZJ6 230 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 ANKFN1Q8N957 763 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 MINDY2Q8NBR6 621 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 PSD4Q8NDX1 1056 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 PROKR2Q8NFJ6 384 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 OR2L8Q8NGY9 312 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 TESCQ96BS2 214 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 TOE1Q96GM8 510 aaKnown RBP11.43□□□□□ -0.58
PTPRF-205ENST00000414879 KCTD7Q96MP8 289 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 MS4A4EQ96PG1 132 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 LYSMD1Q96S90 227 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 TSSK6Q9BXA6 273 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 KIF13BQ9NQT8 1826 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 CLDN25C9JDP6 229 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 E7EQ34 232 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 PLGP00747 810 aaPredicted RBP11.43□□□□□ -0.58
PTPRF-205ENST00000414879 C1SP09871 688 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 GGT1P19440 569 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 GABRA3P34903 492 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 MMP12P39900 470 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 PLCXD2Q0VAA5 305 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 NR0B2Q15466 257 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 SMARCD3Q6STE5 483 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 KCT2Q8NC54 265 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 DKKL1Q9UK85 242 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 ING4Q9UNL4 249 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 CASC3O15234 703 aaKnown RBP11.43□□□□□ -0.58
PTPRF-205ENST00000414879 AP1G1O43747 822 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 RASAL1O95294 804 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 C8orf89P0DMQ9 161 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 IFI30P13284 250 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 GMFBP60983 142 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 C1orf61Q13536 156 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 SLC36A3Q495N2 470 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms