RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ATP5DP30049 168 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 HMOX2P30519 316 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 FDFT1P37268 417 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PPP1R2P41236 205 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PRKCIP41743 596 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ARCN1P48444 511 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 IFNAR2P48551 515 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 TMED10P49755 219 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ASCL1P50553 236 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 LUMP51884 338 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 THOP1P52888 689 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 AP3M2P53677 418 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 HADHBP55084 474 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 NUP107P57740 925 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 POLR2FP61218 127 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ISL1P61371 349 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 HNRNPKP61978 463 aaKnown RBP eCLIP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 MYBPC1Q00872 1141 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 CDR2Q01850 454 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 RELQ04864 619 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PRKCZQ05513 592 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 LRRC63Q05C16 580 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 GFPT1Q06210 699 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PNRC1Q12796 327 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PLA2G7Q13093 441 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PPP2R5CQ13362 524 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 MED21Q13503 144 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 EFTUD2Q15029 972 aaKnown RBP eCLIP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 OXA1LQ15070 435 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 RPS6KA1Q15418 735 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ALX1Q15699 326 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 IL17AQ16552 155 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 MOGQ16653 247 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PDK4Q16654 411 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 TRMT5Q32P41 509 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 TAF1BQ53T94 588 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 SFT2D3Q587I9 215 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 C6orf136Q5SQH8 315 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 CCNJQ5T5M9 372 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 GRTP1Q5TC63 336 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 CYP4A22Q5TCH4 519 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 AGAP7PQ5VUJ5 663 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 SLX4IPQ5VYV7 408 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ARHGAP17Q68EM7 881 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 OR7E24Q6IFN5 339 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 CENPPQ6IPU0 288 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PRR27Q6MZM9 219 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 NANOGP8Q6NSW7 305 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 LINGO4Q6UY18 593 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PPP1R21Q6ZMI0 780 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ANO5Q75V66 913 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 DNAJB7Q7Z6W7 309 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 DSG4Q86SJ6 1040 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PHLDB2Q86SQ0 1253 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 DHDDSQ86SQ9 333 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 NFE4Q86UQ8 179 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 SLC51BQ86UW2 128 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 NT5DC3Q86UY8 548 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 VPS36Q86VN1 386 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 LRRC6Q86X45 466 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 MMAAQ8IVH4 418 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ODF3L1Q8IXM7 274 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZC3H3Q8IXZ2 948 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 CENPSQ8N2Z9 138 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ELMOD1Q8N336 334 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ANKRD13CQ8N6S4 541 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 FAM133AQ8N9E0 248 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 DDHD1Q8NEL9 900 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 LILRB4Q8NHJ6 448 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 NCOA7Q8NI08 942 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 FBXO25Q8TCJ0 367 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ACMSDQ8TDX5 336 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZNF75CPQ92670 426 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 EXT2Q93063 718 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 P2RX5Q93086 422 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 BORCS5Q969J3 196 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ATP6V1E2Q96A05 226 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 CCDC127Q96BQ5 260 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 VMP1Q96GC9 406 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 SFXN2Q96NB2 322 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZNF558Q96NG5 402 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 RUNDC3BQ96NL0 473 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PANX3Q96QZ0 392 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 TGS1Q96RS0 853 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PSMB7Q99436 277 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 FEVQ99581 238 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 SELENOSQ9BQE4 189 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 FERMT1Q9BQL6 677 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 MGME1Q9BQP7 344 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 GPATCH1Q9BRR8 931 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 LMF2Q9BU23 707 aaKnown RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 FNDC11Q9BVV2 318 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 MROQ9BYG7 248 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 PITPNM3Q9BZ71 974 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 DRC3Q9H069 523 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 NT5C3AQ9H0P0 336 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 C1orf21Q9H246 121 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 RPAP3Q9H6T3 665 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 FKRPQ9H9S5 495 aa2.25□□□□□ -2.05
HMGB3P2-201ENST00000411913 LY9Q9HBG7 655 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms