RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 MVDP53602 400 aa18.84■□□□□ 0.61
LIMS2-207ENST00000409808 PRKCDQ05655 676 aa18.84■□□□□ 0.61
LIMS2-207ENST00000409808 KRR1Q13601 381 aaKnown RBP18.84■□□□□ 0.61
LIMS2-207ENST00000409808 SNX29P2Q8IUI4 249 aa18.84■□□□□ 0.61
LIMS2-207ENST00000409808 SLC30A8Q8IWU4 369 aa18.84■□□□□ 0.61
LIMS2-207ENST00000409808 STX19Q8N4C7 294 aa18.84■□□□□ 0.61
LIMS2-207ENST00000409808 FBXO15Q8NCQ5 510 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-207ENST00000409808 HMGB4Q8WW32 186 aa18.84■□□□□ 0.61
LIMS2-207ENST00000409808 HLA-CQ95604 372 aa18.84■□□□□ 0.61
LIMS2-207ENST00000409808 EFHD2Q96C19 240 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-207ENST00000409808 NRTNQ99748 197 aa18.84■□□□□ 0.61
LIMS2-207ENST00000409808 KLK4Q9Y5K2 254 aa18.84■□□□□ 0.61
LIMS2-207ENST00000409808 CFAP20Q9Y6A4 193 aaKnown RBP18.84■□□□□ 0.61
LIMS2-207ENST00000409808 MPZL2O60487 215 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 GABRG2P18507 467 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 GADD45AP24522 165 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 AQP1P29972 269 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 HMGA2P52926 109 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 SPIBQ01892 262 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 ZNF763Q0D2J5 394 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 SF1Q15637 639 aaKnown RBP18.83■□□□□ 0.61
LIMS2-207ENST00000409808 ZNF630Q2M218 657 aaPredicted RBP18.83■□□□□ 0.61
LIMS2-207ENST00000409808 CRB2Q5IJ48 1285 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 EOGTQ5NDL2 527 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 SLCO4C1Q6ZQN7 724 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 LYSMD2Q8IV50 215 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.83■□□□□ 0.61
LIMS2-207ENST00000409808 PROX1Q92786 737 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 WDR34Q96EX3 536 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 ZDHHC5Q9C0B5 715 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 OR52A5Q9H2C5 316 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 EHD1Q9H4M9 534 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 ZBTB20Q9HC78 741 aaPredicted RBP18.83■□□□□ 0.61
LIMS2-207ENST00000409808 C2orf42Q9NWW7 574 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 MMP17Q9ULZ9 603 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 NCKAP1Q9Y2A7 1128 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 PCDHGA3Q9Y5H0 932 aa18.83■□□□□ 0.61
LIMS2-207ENST00000409808 GPC6Q9Y625 555 aaPredicted RBP18.83■□□□□ 0.61
LIMS2-207ENST00000409808 SH3D21A4FU49 640 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 SRFP11831 508 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 ACADLP28330 430 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 S100A5P33763 92 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 PRIM2P49643 509 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 TPMTP51580 245 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 CLDN2P57739 230 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 TDGQ13569 410 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 SCARB2Q14108 478 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 IRF3Q14653 427 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 LGI4Q8N135 537 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 GEMIN6Q8WXD5 167 aaKnown RBP18.83■□□□□ 0.6
LIMS2-207ENST00000409808 MTERF3Q96E29 417 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 MAPKAP1Q9BPZ7 522 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 ZNF226Q9NYT6 803 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 MOSPD1Q9UJG1 213 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 ZNF229Q9UJW7 825 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 CA14Q9ULX7 337 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 PLEKHM1Q9Y4G2 1056 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 PCDHGA4Q9Y5G9 962 aa18.83■□□□□ 0.6
LIMS2-207ENST00000409808 ARRDC5A6NEK1 342 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 GPR37L1O60883 481 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 IL9P15248 144 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 RPS13P62277 151 aaKnown RBP18.82■□□□□ 0.6
LIMS2-207ENST00000409808 HPS1Q92902 700 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 SLC35A5Q9BS91 424 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 EFCAB11Q9BUY7 163 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 PHPT1Q9NRX4 125 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-207ENST00000409808 IMPAD1Q9NX62 359 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 RAPGEFL1Q9UHV5 662 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 PLAGL1Q9UM63 463 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 EXO1Q9UQ84 846 aaKnown RBP18.82■□□□□ 0.6
LIMS2-207ENST00000409808 HCN4Q9Y3Q4 1203 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 PEX16Q9Y5Y5 336 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 POM121BA6NF01 834 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 EFCAB10A6NFE3 127 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 GLULP15104 373 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 CDH12P55289 794 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 TSTA3Q13630 321 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-207ENST00000409808 PDE7AQ13946 482 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 PTCRAQ6ISU1 281 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-207ENST00000409808 Q6ZPB1 254 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-207ENST00000409808 ZNF367Q7RTV3 350 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 CCDC103Q8IW40 242 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 ZNF480Q8WV37 535 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 PIP5K1AQ99755 562 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 PRM3Q9NNZ6 103 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 C1GALT1Q9NS00 363 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 TMEM184CQ9NVA4 438 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 GPATCH2Q9NW75 528 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 CNOT2Q9NZN8 540 aaKnown RBP18.82■□□□□ 0.6
LIMS2-207ENST00000409808 SCML1Q9UN30 329 aa18.82■□□□□ 0.6
LIMS2-207ENST00000409808 COL6A3P12111 3177 aa18.81■□□□□ 0.6
LIMS2-207ENST00000409808 MN1Q10571 1320 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-207ENST00000409808 H0Y8X5 98 aa18.81■□□□□ 0.6
LIMS2-207ENST00000409808 ACP5P13686 325 aa18.81■□□□□ 0.6
LIMS2-207ENST00000409808 ETFAP13804 333 aa18.81■□□□□ 0.6
LIMS2-207ENST00000409808 ALDH9A1P49189 494 aa18.81■□□□□ 0.6
LIMS2-207ENST00000409808 LIMK1P53667 647 aa18.81■□□□□ 0.6
LIMS2-207ENST00000409808 HBA1P69905 142 aa18.81■□□□□ 0.6
LIMS2-207ENST00000409808 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.81■□□□□ 0.6
LIMS2-207ENST00000409808 EXOC3L2Q2M3D2 409 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms