RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CKAP5Q14008 2032 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 PRMT3O60678 531 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 ZNF821O75541 412 aaPredicted RBP22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 PDGFAP04085 211 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 EVI2BP34910 448 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 MRPL28Q13084 256 aaKnown RBP22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 NFE2L1Q14494 772 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 RETSATQ6NUM9 610 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 MZT2BQ6NZ67 158 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 NANOGP1Q8N7R0 232 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 KIAA1143Q96AT1 154 aaPredicted RBP22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 QRFPRQ96P65 431 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 PKP4Q99569 1192 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 SLC35A5Q9BS91 424 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 RAB23Q9ULC3 237 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 AP1M2Q9Y6Q5 423 aa22.87■■□□□ 1.25
CSNK1E-203ENST00000396832 PRAMEF33A0A0G2JMD5 474 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 PRAMEF10O60809 474 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 GADD45GO95257 159 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 PCSK2P16519 638 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 SERPINA4P29622 427 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 SDC2P34741 201 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 MMP21Q8N119 569 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 Q8N402 240 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 DUSP18Q8NEJ0 188 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 MARVELD3Q96A59 401 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 TRAF4Q9BUZ4 470 aaPredicted RBP22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 MALT1Q9UDY8 824 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 ENOPH1Q9UHY7 261 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 ITM2BQ9Y287 266 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 OR5K3A6NET4 321 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 WEE1P30291 646 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 RPS26P62854 115 aaKnown RBP22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 LMAN2Q12907 356 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 SCARB2Q14108 478 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 NCF4Q15080 339 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 ZBTB37Q5TC79 503 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 HJURPQ8NCD3 748 aaPredicted RBP22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 ZC3HAV1LQ96H79 300 aaKnown RBP22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 PIP5K1AQ99755 562 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 GALNT9Q9HCQ5 603 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 FZD3Q9NPG1 666 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 COQ3Q9NZJ6 369 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 CORO2BQ9UQ03 480 aa22.86■■□□□ 1.25
CSNK1E-203ENST00000396832 ALPK3Q96L96 1907 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 TLR4O00206 839 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 RPS13P62277 151 aaKnown RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 CAP1Q01518 475 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 CELF5Q8N6W0 485 aaKnown RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 WDR20Q8TBZ3 569 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 DNAJA4Q8WW22 397 aaPredicted RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 AUTS2Q8WXX7 1259 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 ANKRA2Q9H9E1 313 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 THSD1Q9NS62 852 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 RUVBL1Q9Y265 456 aaKnown RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 UNC80Q8N2C7 3258 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 ARHGEF33A8MVX0 844 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 PDPK1O15530 556 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 LRRTM2O43300 516 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 C1SP09871 688 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 PRKAR1AP10644 381 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 PPIBP23284 216 aaKnown RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 SLC9A3P48764 834 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 TAGLNQ01995 201 aaKnown RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 MLLT11Q13015 90 aaPredicted RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 CCNJQ5T5M9 372 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 LYPLAL1Q5VWZ2 237 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 MEDAGQ5VYS4 303 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 TMPRSS11BQ86T26 416 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 DDX53Q86TM3 631 aaKnown RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 HUS1BQ8NHY5 278 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 OR4K3Q96R72 315 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 DCLRE1CQ96SD1 692 aaKnown RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 NELL2Q99435 816 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 NMNAT1Q9HAN9 279 aaPredicted RBP22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 PCDH10Q9P2E7 1040 aa22.85■■□□□ 1.25
CSNK1E-203ENST00000396832 NPIPB8E9PQR5 432 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 H7C4K7 107 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 KPNA5O15131 536 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 HCN1O60741 890 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 OR7A10O76100 309 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 IGSF6O95976 241 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 C8GP07360 202 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 ARSBP15848 533 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 PTGS2P35354 604 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 LIMS1P48059 325 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 LRRC74AQ0VAA2 488 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 ZNF628Q5EBL2 1059 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 RPS26P11Q5JNZ5 115 aaPredicted RBP22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 TMIGD1Q6UXZ0 262 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 C9orf62Q8N4C0 152 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 HYLS1Q96M11 299 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 SMG9Q9H0W8 520 aaKnown RBP22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 COMMD3Q9UBI1 195 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 LYRM1O43325 122 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 FAM157BP0CG42 384 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 IDSP22304 550 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 CLDN20P56880 219 aa22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 C1DQ13901 141 aaKnown RBP22.84■■□□□ 1.25
CSNK1E-203ENST00000396832 TAGAPQ8N103 731 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms