RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CDH24Q86UP0 819 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 NUDT13Q86X67 352 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 C2orf73Q8N5S3 287 aaPredicted RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 OR2L8Q8NGY9 312 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 INSM2Q96T92 566 aaPredicted RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 TUBA1CQ9BQE3 449 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 DOHHQ9BU89 302 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 MENTQ9BUN1 341 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 APOOQ9BUR5 198 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 NLNQ9BYT8 704 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 UTS2RQ9UKP6 389 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 MAGED1Q9Y5V3 778 aaPredicted RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 LOC100130705A0A1B0GUX0 176 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 C12orf71A8MTZ7 269 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 CLEC3AO75596 197 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 OR7A10O76100 309 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 DDCP20711 480 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 EFNA1P20827 205 aaPredicted RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 SOX9P48436 509 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 CDH15P55291 814 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 ITGA1P56199 1179 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 PRDX1Q06830 199 aaKnown RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 GAB1Q13480 694 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 DNASE1L3Q13609 305 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 FGL2Q14314 439 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.82□□□□□ -1.16
UBR4-202ENST00000375224 ZC3H7AQ8IWR0 971 aaKnown RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 NAGSQ8N159 534 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 LMNTD1Q8N9Z9 388 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 OR5H6Q8NGV6 325 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 OR5P2Q8WZ92 322 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 PIK3R3Q92569 461 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 ZNF347Q96SE7 839 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 DPH2Q9BQC3 489 aaPredicted RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 BTBD1Q9H0C5 482 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 ABCG4Q9H172 646 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 CXorf21Q9HAI6 301 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 PCDHGB3Q9Y5G1 929 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 CFAP20Q9Y6A4 193 aaKnown RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 HSPE1-MOB4S4R3N1 261 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3DA0A087WVF3 549 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3IA0A087WXS9 549 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3EA0A087X179 549 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3KA0A087X1G2 549 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 A0A1B0GTW7 788 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3FA6NER0 549 aaPredicted RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 ANTXRLA6NF34 631 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 MYO1GB0I1T2 1018 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3LB9A6J9 549 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 PLPP1O14494 284 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 SLC22A1O15245 554 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 DYRK3O43781 588 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 GBAP04062 536 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 IFNA16P05015 189 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 CEACAM5P06731 702 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3HP0C7X1 549 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 IGFBP5P24593 272 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 RYKP34925 604 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 OR3A3P47888 321 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 GABARAPL2P60520 117 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 SELENOWP63302 87 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 MC1RQ01726 317 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 KCNAB2Q13303 367 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TMEM35AQ53FP2 167 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 BROXQ5VW32 411 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3GQ6DHY5 549 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3CQ6IPX1 549 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 USP30Q70CQ3 517 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TBC1D3Q8IZP1 549 aaPredicted RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 KLK6Q92876 244 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TPD52L3Q96J77 140 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 NECTIN4Q96NY8 510 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 ALPK1Q96QP1 1244 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 MBOAT4Q96T53 435 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 EPYCQ99645 322 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 TMEM246Q9BRR3 403 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 WDR12Q9GZL7 423 aaKnown RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 SOX17Q9H6I2 414 aaPredicted RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 NEUROD4Q9HD90 331 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 PADI2Q9Y2J8 665 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.82□□□□□ -1.16
UBR4-202ENST00000375224 COLEC10Q9Y6Z7 277 aa7.82□□□□□ -1.16
UBR4-202ENST00000375224 A0A1W2PPV9 198 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 PRR23AA6NEV1 266 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 OR5K4A6NMS3 321 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 H7BY64 318 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 RFXAPO00287 272 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 OR1F1O43749 312 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 TNFRSF21O75509 655 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 HOXB2P14652 356 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 ITGA2P17301 1181 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 CCNA2P20248 432 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 EEF1B2P24534 225 aaKnown RBP7.81□□□□□ -1.16
UBR4-202ENST00000375224 NDUFS1P28331 727 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 BSGP35613 385 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 ARFIP1P53367 373 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 ADPRHP54922 357 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 SCARB2Q14108 478 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 UAP1L1Q3KQV9 507 aa7.81□□□□□ -1.16
UBR4-202ENST00000375224 C4orf46Q504U0 113 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms