RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 SSR2P43308 183 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 SMSP52788 366 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 IGLV3-21P80748 117 aaPredicted RBP13.2□□□□□ -0.3
UBXN11-207ENST00000374223 CAV1Q03135 178 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 FOLH1Q04609 750 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 PCDH1Q08174 1060 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 ASPHQ12797 758 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 STX4Q12846 297 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 CPSF6Q16630 551 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBXN11-207ENST00000374223 HIST2H2ACQ16777 129 aaPredicted RBP13.2□□□□□ -0.3
UBXN11-207ENST00000374223 AP5B1Q2VPB7 878 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 TECRLQ5HYJ1 363 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 PAGE2BQ5JRK9 111 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 HIST2H2AA3Q6FI13 130 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 LYPD8Q6UX82 237 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 HSDL2Q6YN16 418 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 CEP128Q6ZU80 1094 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 TMEM132CQ8N3T6 1108 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 FAM98AQ8NCA5 519 aaKnown RBP13.2□□□□□ -0.3
UBXN11-207ENST00000374223 OR2M7Q8NG81 312 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 OR52B6Q8NGF0 335 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 ASB15Q8WXK1 588 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 SEC16BQ96JE7 1060 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 C16orf45Q96MC5 204 aaPredicted RBP13.2□□□□□ -0.3
UBXN11-207ENST00000374223 PHACTR1Q9C0D0 580 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 VPS11Q9H270 941 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 PROK2Q9HC23 129 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 PLSCR2Q9NRY7 297 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 ERVK-11Q9UQG0 969 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 ASB4Q9Y574 426 aa13.2□□□□□ -0.3
UBXN11-207ENST00000374223 A8MVJ9 347 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 SBK3P0C264 359 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 EPB42P16452 691 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 TSPAN8P19075 237 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 SSTR2P30874 369 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 PTGS2P35354 604 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 PIGAP37287 484 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 GTF2H2Q13888 395 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 MRM1Q6IN84 353 aaKnown RBP13.19□□□□□ -0.3
UBXN11-207ENST00000374223 GTF2H2CQ6P1K8 395 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 TMEM64Q6YI46 380 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 MMP21Q8N119 569 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 MORN4Q8NDC4 146 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 OR5M9Q8NGP3 310 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 FAM57AQ8TBR7 257 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 ANP32BQ92688 251 aaKnown RBP13.19□□□□□ -0.3
UBXN11-207ENST00000374223 SDCCAG3Q96C92 435 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 CMTM7Q96FZ5 175 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 SENP5Q96HI0 755 aaPredicted RBP13.19□□□□□ -0.3
UBXN11-207ENST00000374223 CCDC77Q9BR77 488 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 UCK2Q9BZX2 261 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 CDC42EP4Q9H3Q1 356 aaKnown RBP13.19□□□□□ -0.3
UBXN11-207ENST00000374223 ZBTB26Q9HCK0 441 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 PRM3Q9NNZ6 103 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 HPF1Q9NWY4 346 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 TUBA8Q9NY65 449 aaPredicted RBP13.19□□□□□ -0.3
UBXN11-207ENST00000374223 PPT2Q9UMR5 302 aa13.19□□□□□ -0.3
UBXN11-207ENST00000374223 MRPS33Q9Y291 106 aaKnown RBP13.19□□□□□ -0.3
UBXN11-207ENST00000374223 A0A087X1B8 175 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 A0A088AWK7 358 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 A0A0A6YYD5 115 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 NKX2-6A6NCS4 301 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 KLRC4-KLRK1H3BQV0 150 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 PGRMC2O15173 223 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 URI1O94763 535 aaPredicted RBP13.18□□□□□ -0.3
UBXN11-207ENST00000374223 GLSO94925 669 aaPredicted RBP13.18□□□□□ -0.3
UBXN11-207ENST00000374223 KLHL2O95198 593 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 CLDN14O95500 239 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 ACSL3O95573 720 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 IGKV3-11P04433 115 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 RFPL3SP0C7P2 107 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 GFAPP14136 432 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 CAPN3P20807 821 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 ZNF10P21506 573 aaPredicted RBP13.18□□□□□ -0.3
UBXN11-207ENST00000374223 PPIAP62937 165 aaKnown RBP13.18□□□□□ -0.3
UBXN11-207ENST00000374223 FOXO1Q12778 655 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 TMEM35AQ53FP2 167 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 C8orf74Q6P047 294 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 CCDC71Q8IV32 467 aaPredicted RBP13.18□□□□□ -0.3
UBXN11-207ENST00000374223 PTGR2Q8N8N7 351 aaPredicted RBP13.18□□□□□ -0.3
UBXN11-207ENST00000374223 OR14A16Q8NHC5 309 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 RHEBL1Q8TAI7 183 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 WDR20Q8TBZ3 569 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 RGMAQ96B86 450 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 PHF21BQ96EK2 531 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 TTTY12Q9BZ98 90 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 ACSS3Q9H6R3 686 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 RPF2Q9H7B2 306 aaKnown RBP13.18□□□□□ -0.3
UBXN11-207ENST00000374223 NOL11Q9H8H0 719 aaKnown RBP13.18□□□□□ -0.3
UBXN11-207ENST00000374223 IPPKQ9H8X2 491 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 ACTR8Q9H981 624 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 TIMMDC1Q9NPL8 285 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 FARSBQ9NSD9 589 aaKnown RBP13.18□□□□□ -0.3
UBXN11-207ENST00000374223 PNPLA3Q9NST1 481 aa13.18□□□□□ -0.3
UBXN11-207ENST00000374223 KDM4EB2RXH2 506 aaPredicted RBP13.17□□□□□ -0.3
UBXN11-207ENST00000374223 NPIPA2E9PIF3 369 aa13.17□□□□□ -0.3
UBXN11-207ENST00000374223 E9PLN8 166 aa13.17□□□□□ -0.3
UBXN11-207ENST00000374223 NPIPA3F8WFD2 350 aa13.17□□□□□ -0.3
UBXN11-207ENST00000374223 PROM1O43490 865 aa13.17□□□□□ -0.3
UBXN11-207ENST00000374223 TUBB4AP04350 444 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms