RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PROM1O43490 865 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 COX7A2P14406 83 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 DNASE1P24855 282 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 KCNJ2P63252 427 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 FOXD4Q12950 439 aaPredicted RBP19.45■□□□□ 0.7
CD47-202ENST00000361309 GPSM1Q86YR5 675 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 OR4N5Q8IXE1 308 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 C9orf40Q8IXQ3 194 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 SLC35F6Q8N357 371 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 SRFBP1Q8NEF9 429 aaKnown RBP19.45■□□□□ 0.7
CD47-202ENST00000361309 NUBPLQ8TB37 319 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 SLC22A8Q8TCC7 542 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 PAQR8Q8TEZ7 354 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 TBCDQ9BTW9 1192 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 EFCAB11Q9BUY7 163 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 RHOJQ9H4E5 214 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 MOCS1Q9NZB8 636 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 BOKQ9UMX3 212 aaPredicted RBP19.45■□□□□ 0.7
CD47-202ENST00000361309 SPACA6W5XKT8 324 aa19.45■□□□□ 0.7
CD47-202ENST00000361309 KIAA1549Q9HCM3 1950 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 SYT5O00445 386 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 FGF17O60258 216 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 SH3BGRLO75368 114 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 STK16O75716 305 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 CPN2P22792 545 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 MSH2P43246 934 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 STT3AP46977 705 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 ARL4CP56559 192 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 PDK4Q16654 411 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 HIST2H2ACQ16777 129 aaPredicted RBP19.44■□□□□ 0.7
CD47-202ENST00000361309 HIST2H2AA3Q6FI13 130 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 SULT1C3Q6IMI6 304 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 LYPD8Q6UX82 237 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 DGAT2L6Q6ZPD8 337 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 SEM1Q6ZVN7 128 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 CDC20BQ86Y33 519 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 ULK2Q8IYT8 1036 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 MMP21Q8N119 569 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 RELL2Q8NC24 303 aaPredicted RBP19.44■□□□□ 0.7
CD47-202ENST00000361309 GOT1L1Q8NHS2 421 aaPredicted RBP19.44■□□□□ 0.7
CD47-202ENST00000361309 ZNF473Q8WTR7 871 aaKnown RBP19.44■□□□□ 0.7
CD47-202ENST00000361309 PPWD1Q96BP3 646 aaKnown RBP19.44■□□□□ 0.7
CD47-202ENST00000361309 SPACA9Q96E40 222 aaPredicted RBP19.44■□□□□ 0.7
CD47-202ENST00000361309 DGAT2Q96PD7 388 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 MCMBPQ9BTE3 642 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 MS4A8Q9BY19 250 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 SLC6A15Q9H2J7 730 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 GSX1Q9H4S2 264 aaPredicted RBP19.44■□□□□ 0.7
CD47-202ENST00000361309 CAB39LQ9H9S4 337 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 PROK2Q9HC23 129 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 PRM3Q9NNZ6 103 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 ZFP64Q9NPA5 681 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 TRMT1Q9NXH9 659 aaKnown RBP19.44■□□□□ 0.7
CD47-202ENST00000361309 SNX12Q9UMY4 172 aa19.44■□□□□ 0.7
CD47-202ENST00000361309 DOCK7Q96N67 2140 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 LRRC3CA6NJW4 275 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 A6NNC1 897 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 HSPB2A8KAH6 182 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 HRKO00198 91 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 CES2O00748 559 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 PIAS1O75925 651 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 WISP3O95389 354 aaPredicted RBP19.43■□□□□ 0.7
CD47-202ENST00000361309 IGKV3-11P04433 115 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 EPORP19235 508 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 HIST1H1TP22492 207 aaPredicted RBP19.43■□□□□ 0.7
CD47-202ENST00000361309 PEX19P40855 299 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 SLC12A2P55011 1212 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 IGLV3-21P80748 117 aaPredicted RBP19.43■□□□□ 0.7
CD47-202ENST00000361309 IRF8Q02556 426 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 CHIT1Q13231 466 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 LAPTM5Q13571 262 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 FASTKD3Q14CZ7 662 aaKnown RBP19.43■□□□□ 0.7
CD47-202ENST00000361309 OR4D1Q15615 310 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 HSPB2Q16082 182 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 AP5B1Q2VPB7 878 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 PAGE2BQ5JRK9 111 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 CDKL4Q5MAI5 379 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 FBXW8Q8N3Y1 598 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 FBXO36Q8NEA4 188 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 NEIL3Q8TAT5 605 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 DOK4Q8TEW6 326 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 ACKR4Q9NPB9 350 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 NSMCE4AQ9NXX6 385 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 MTO1Q9Y2Z2 717 aaKnown RBP19.43■□□□□ 0.7
CD47-202ENST00000361309 PCDHGB3Q9Y5G1 929 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 EXPH5Q8NEV8 1989 aa19.43■□□□□ 0.7
CD47-202ENST00000361309 ABCA2Q9BZC7 2435 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 CCNT2O60583 730 aaKnown RBP19.42■□□□□ 0.7
CD47-202ENST00000361309 SCELO95171 688 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 TGFB1P01137 390 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 CCDC166P0CW27 439 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 BMP5P22003 454 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 TRPC1P48995 793 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 POU4F1Q01851 419 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 TBL3Q12788 808 aaKnown RBP19.42■□□□□ 0.7
CD47-202ENST00000361309 PDIA2Q13087 525 aaKnown RBP19.42■□□□□ 0.7
CD47-202ENST00000361309 FLYWCH1Q4VC44 716 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 TMEM35AQ53FP2 167 aa19.42■□□□□ 0.7
CD47-202ENST00000361309 LRRC25Q8N386 305 aaPredicted RBP19.42■□□□□ 0.7
CD47-202ENST00000361309 LIX1Q8N485 282 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms