RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 MBTPS1Q14703 1052 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 ZXDCQ2QGD7 858 aaPredicted RBP13.49□□□□□ -0.25
PCDH8-201ENST00000338862 PDZD3Q86UT5 571 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 FLCNQ8NFG4 579 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 OR5H6Q8NGV6 325 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 TEX47Q8TBZ9 253 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 DEDD2Q8WXF8 326 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 ZNF566Q969W8 418 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 CCDC120Q96HB5 630 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 C7orf34Q96L11 122 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 SLC6A16Q9GZN6 736 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 OR51V1Q9H2C8 321 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 URB1O60287 2271 aaKnown RBP13.49□□□□□ -0.25
PCDH8-201ENST00000338862 CCL16O15467 120 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 CHRNB1P11230 501 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 PAICSP22234 425 aaKnown RBP13.49□□□□□ -0.25
PCDH8-201ENST00000338862 DGKGP49619 791 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 WNT3P56703 355 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 FKBP1BP68106 108 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 DSC1Q08554 894 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 LASP1Q14847 261 aaKnown RBP13.49□□□□□ -0.25
PCDH8-201ENST00000338862 BEST4Q8NFU0 473 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 OR6F1Q8NGZ6 308 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 MRPL15Q9P015 296 aaKnown RBP13.49□□□□□ -0.25
PCDH8-201ENST00000338862 TAC3Q9UHF0 121 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 FBXW2Q9UKT8 454 aa13.49□□□□□ -0.25
PCDH8-201ENST00000338862 SIP14410 1827 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 PAPPA2Q9BXP8 1791 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 I3L521 148 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 LATO43561 262 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 CSO75390 466 aaKnown RBP13.48□□□□□ -0.25
PCDH8-201ENST00000338862 LEFTY1O75610 366 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 SPINT3P49223 89 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 CHST9Q7L1S5 443 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 C9orf43Q8TAL5 461 aaPredicted RBP13.48□□□□□ -0.25
PCDH8-201ENST00000338862 MND1Q9BWT6 205 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 RHBGQ9H310 441 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 MAN2B2Q9Y2E5 1009 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 PCDHGB1Q9Y5G3 927 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 ENPP4Q9Y6X5 453 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 NYNRINQ9P2P1 1898 aaKnown RBP13.48□□□□□ -0.25
PCDH8-201ENST00000338862 TRBV23OR9-2A0A075B6M9 112 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 FAM183AA6NL82 134 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 H7BY64 318 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 OR1F1O43749 312 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 AP1S2P56377 157 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 REEP3Q6NUK4 255 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 C22orf39Q6P5X5 142 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 C16orf62Q7Z3J2 963 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 TMEM25Q86YD3 366 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 OXR1Q8N573 874 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 OR52P1PQ8NH57 321 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 BCL7CQ8WUZ0 217 aaPredicted RBP13.48□□□□□ -0.25
PCDH8-201ENST00000338862 SMG7Q92540 1137 aaKnown RBP13.48□□□□□ -0.25
PCDH8-201ENST00000338862 SCRN2Q96FV2 425 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 PRAP1Q96NZ9 151 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 MAPKAP1Q9BPZ7 522 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 BCL7BQ9BQE9 202 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 ZNF224Q9NZL3 707 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 ENOPH1Q9UHY7 261 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 ERVW-1Q9UQF0 538 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 PCDHGA2Q9Y5H1 932 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 TRBV5-3A0A0A0MS03 114 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 PCP4L1A6NKN8 68 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 RPS25P62851 125 aaKnown RBP13.48□□□□□ -0.25
PCDH8-201ENST00000338862 RPL6Q02878 288 aaKnown RBP13.48□□□□□ -0.25
PCDH8-201ENST00000338862 MGAT3Q09327 533 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 TMEM115Q12893 351 aaPredicted RBP13.48□□□□□ -0.25
PCDH8-201ENST00000338862 VEZF1Q14119 521 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 CNIH2Q6PI25 160 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 UBQLNLQ8IYU4 475 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 DNAJC5GQ8N7S2 189 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 SLC43A3Q8NBI5 491 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 BBS10Q8TAM1 723 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 ING5Q8WYH8 240 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 CDCP1Q9H5V8 836 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 EGLN3Q9H6Z9 239 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 SEC14L4Q9UDX3 406 aa13.48□□□□□ -0.25
PCDH8-201ENST00000338862 GAPDHSO14556 408 aaPredicted RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 TSPAN4O14817 238 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 SSNA1O43805 119 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 PRKRAO75569 313 aaKnown RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 POP4O95707 220 aaKnown RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 IGLV3-27P01718 113 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 MRPL3P09001 348 aaKnown RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 SSR2P43308 183 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 MAGEA2P43356 314 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 MAP2K3P46734 347 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 ST8SIA6P61647 398 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 ZNF267Q14586 743 aaPredicted RBP13.47□□□□□ -0.25
PCDH8-201ENST00000338862 SYPL1Q16563 259 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 FLYWCH1Q4VC44 716 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 C9orf64Q5T6V5 341 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 HSDL2Q6YN16 418 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 ZNF461Q8TAF7 563 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 KLK6Q92876 244 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 RNF121Q9H920 327 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 GALNT9Q9HCQ5 603 aa13.47□□□□□ -0.25
PCDH8-201ENST00000338862 ACER3Q9NUN7 267 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms