RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 LHFPL3Q86UP9 236 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 ARL14Q8N4G2 192 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 GLB1L3Q8NCI6 653 aaPredicted RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 SAMD11Q96NU1 681 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 OR14A2Q96R54 314 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 OR51B5Q9H339 312 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 CLDND1Q9NY35 253 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 DIP2CQ9Y2E4 1556 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 CPNE6O95741 557 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 G6PDP11413 515 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 NSG1P42857 185 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PTGER3P43115 390 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 HES5Q5TA89 166 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 DESI1Q6ICB0 168 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 FIP1L1Q6UN15 594 aaKnown RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 NLGN4XQ8N0W4 816 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 OR6N1Q8NGY5 312 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 OR14K1Q8NGZ2 314 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 MTG2Q9H4K7 406 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 NLKQ9UBE8 527 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 KLHL33A6NCF5 533 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 CLDN7O95471 211 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 STSP08842 583 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 FASLGP48023 281 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 RPS13P62277 151 aaKnown RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 IGDCC3Q8IVU1 814 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 ST7LQ8TDW4 575 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 RAB8BQ92930 207 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 ELMOD3Q96FG2 381 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 ZNF334Q9HCZ1 680 aaPredicted RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 FBXW11Q9UKB1 542 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PRORSD1PA6NEY8 169 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 GNSP15586 552 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 CSNK2A2P19784 350 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 RAB8AP61006 207 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 GALK2Q01415 458 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PMS2P3Q13401 168 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 NKPD1Q17RQ9 610 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ZNF181Q2M3W8 571 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ZNF529Q6P280 563 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 OR8D2Q9GZM6 311 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 QRSL1Q9H0R6 528 aaKnown RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 MAGEH1Q9H213 219 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 OR51J1Q9H342 316 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 HCN4Q9Y3Q4 1203 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 M0R2N6 131 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 RGS9O75916 674 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 SLC18A1P54219 525 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 LILRA4P59901 499 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 DUSP28Q4G0W2 176 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PRRT3Q5FWE3 981 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PACRGLQ8N7B6 248 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 KREMEN2Q8NCW0 462 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 AURKBQ96GD4 344 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 HTR3EA5X5Y0 456 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 MROH2AA6NES4 1674 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ARVCFO00192 962 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 SCO2O43819 266 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PEX14O75381 377 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 IFNA5P01569 189 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ESR1P03372 595 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ALDOBP05062 364 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 GNB3P16520 340 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 CELP19835 753 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 GDI1P31150 447 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PGGT1BP53609 377 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PTPRCAPQ14761 206 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 P2RY14Q15391 338 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ITPRIPL2Q3MIP1 535 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 TMEM126BQ8IUX1 230 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ZNF584Q8IVC4 421 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 IQCF1Q8N6M8 205 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PAQR8Q8TEZ7 354 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 SAT2Q96F10 170 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 MUS81Q96NY9 551 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 MMP27Q9H306 513 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 FBRSL1Q9HCM7 1045 aaKnown RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 KCTD3Q9Y597 815 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 HEMK1Q9Y5R4 338 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 MEIS3P1A6NDR6 274 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 SHOXO15266 292 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 LYPLA2O95372 231 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 RETP07949 1114 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PYCR1P32322 319 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 MBOAT1Q6ZNC8 495 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 OR10T2Q8NGX3 314 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 LRCH3Q96II8 777 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 NECAB3Q96P71 396 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 B3GAT2Q9NPZ5 323 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 OXSMQ9NWU1 459 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 GRHPRQ9UBQ7 328 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 RAB19A4D1S5 217 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ATP6V1G2-DDX39BF2Z307 99 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 B3GALNT1O75752 331 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 PAK4O96013 591 aaPredicted RBP7.6□□□□□ -1.19
CIITA-201ENST00000324288 MAS1P04201 325 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 FPR1P21462 350 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 ST8SIA2Q92186 375 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 MALSU1Q96EH3 234 aa7.6□□□□□ -1.19
CIITA-201ENST00000324288 CD300AQ9UGN4 299 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms