RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 LGR4Q9BXB1 951 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 TMEM184CQ9NVA4 438 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 SPATA6Q9NWH7 488 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 KLHL20Q9Y2M5 609 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 PTPRSQ13332 1948 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 BRWD1Q9NSI6 2320 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 PNMA8CA0A1B0GUJ8 204 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 CCNDBP1O95273 360 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 PRNPP04156 253 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 FPR1P21462 350 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 PSMB5P28074 263 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 RPS26P62854 115 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 HBA1P69905 142 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 ARMC4Q5T2S8 1044 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 DNAJC22Q8N4W6 341 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 GPR151Q8TDV0 419 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 FCGR1BQ92637 280 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 CEP19Q96LK0 163 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 PITX2Q99697 317 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 ZNF717Q9BY31 904 aaPredicted RBP14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 SLC23A2Q9UGH3 650 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 SAMD4AQ9UPU9 718 aaKnown RBP14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 OR1A2Q9Y585 309 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 CCDC88CQ9P219 2028 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 RGS5O15539 181 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 YES1P07947 543 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 ITGA2P17301 1181 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 MADCAM1Q13477 382 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 ZNF79Q15937 498 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 GPAT3Q53EU6 434 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 ADCK2Q7Z695 626 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 GLRX5Q86SX6 157 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 COQ7Q99807 217 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 C19orf43Q9BQ61 176 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 TMEM106CQ9BVX2 250 aa14.82□□□□□ -0.04
SHROOM1-201ENST00000319854 FEZF1A0PJY2 475 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 AKR7A2O43488 359 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 FABP3P05413 133 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 CNTN1Q12860 1018 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 CSTF3Q12996 717 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 PAMR1Q6UXH9 720 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 NPAS3Q8IXF0 933 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 CHCHD4Q8N4Q1 142 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 VPS37AQ8NEZ2 397 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 CCDC32Q9BV29 185 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 BARHL1Q9BZE3 327 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 SDK1Q7Z5N4 2213 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 PIPSLA2A3N6 862 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 CLCA1A8K7I4 914 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 E9PQ18 207 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 CDK2AP1O14519 115 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 UGT2B17O75795 530 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 SLITRK5O94991 958 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 CSF2P04141 144 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 IL7P13232 177 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 IFI30P13284 250 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 POU2F1P14859 743 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 IL1RNP18510 177 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 EN2P19622 333 aaPredicted RBP14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 SNRPD2P62316 118 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 DAB2P98082 770 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 TAP2Q03519 686 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 FAM9CQ8IZT9 166 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 OR4M1Q8NGD0 313 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 OR56A3Q8NH54 315 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 GRPEL2Q8TAA5 225 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 ASB15Q8WXK1 588 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 SUSD6Q92537 303 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 FGF13Q92913 245 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 TRIM63Q969Q1 353 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 HRASLS5Q96KN8 279 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 DHRS9Q9BPW9 319 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 THUMPD1Q9NXG2 353 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 PCDHGB2Q9Y5G2 931 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 V9GYH0 126 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 A0A1W2PQ09 198 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 IGLON5A6NGN9 336 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 SH3BP5O60239 455 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 FHP07954 510 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 IDSP22304 550 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 IL12RB1P42701 662 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 PPIGQ13427 754 aaKnown RBP eCLIP14.81□□□□□ -0.041e-6■■■□□ 16.6
SHROOM1-201ENST00000319854 EFR3AQ14156 821 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 HNRNPA1L2Q32P51 320 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 COQ8BQ96D53 544 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 MACROD1Q9BQ69 325 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 TAC3Q9UHF0 121 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 EXO1Q9UQ84 846 aaKnown RBP14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 PCDHB11Q9Y5F2 797 aa14.81□□□□□ -0.04
SHROOM1-201ENST00000319854 OR6C70A6NIJ9 312 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 H0YIV9 168 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 ZNF780AO75290 641 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 TIA1P31483 386 aaKnown RBP eCLIP14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 PRIM2P49643 509 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 HOXC5Q00444 222 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 ST3GAL4Q11206 333 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 SYCE2Q6PIF2 218 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 OR9A1PQ8NGU1 263 aa14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 VANGL1Q8TAA9 524 aaPredicted RBP14.8□□□□□ -0.04
SHROOM1-201ENST00000319854 GANCQ8TET4 914 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms