RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PTPRHQ9HD43 1115 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 RDH8Q9NYR8 311 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 MAP4K5Q9Y4K4 846 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 ENTPD2Q9Y5L3 495 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 CCR4P51679 360 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 PTPRRQ15256 657 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 ABCA11PQ4W5N1 156 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 PRAMEF17Q5VTA0 474 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 CCBE1Q6UXH8 406 aaPredicted RBP8.46□□□□□ -1.05
COL6A5-202ENST00000312481 LIX1LQ8IVB5 337 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 LCN9Q8WX39 176 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 IL36AQ9UHA7 158 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 GPR34Q9UPC5 381 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 AKR1D1P51857 326 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 RAG2P55895 527 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 ELOA3BQ3SY89 546 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 MANEAQ5SRI9 462 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 ELOA3Q8NG57 546 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 OR13F1Q8NGS4 319 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 RHOXF1Q8NHV9 184 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 CITED4Q96RK1 184 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 SLC25A21Q9BQT8 299 aaPredicted RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 SLC12A9Q9BXP2 914 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 SYT4Q9H2B2 425 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM38AQ9H6F2 299 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 B4GALT5O43286 388 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 EGFP01133 1207 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 CRHBPP24387 322 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 MBTPS1Q14703 1052 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 FBXL22Q6P050 247 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 AGTRAPQ6RW13 159 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 NOXA1Q86UR1 476 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 SVBPQ8N300 66 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 MUL1Q969V5 352 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 C11orf84Q9BUA3 381 aaPredicted RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 FUNDC2Q9BWH2 189 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 C12orf4Q9NQ89 552 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 SNTG1Q9NSN8 517 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 PCDHGA7Q9Y5G6 932 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 SCAMP2O15127 329 aaKnown RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 MT-CYBP00156 380 aaPredicted RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 VIPP01282 170 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 CD48P09326 243 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 UBBP0CG47 229 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 UBCP0CG48 685 aaKnown RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 ALPPL2P10696 532 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 NCBP2P52298 156 aaKnown RBP eCLIP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 SCAND1P57086 179 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 RPS27AP62979 156 aaKnown RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 UBA52P62987 128 aaKnown RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 C4orf46Q504U0 113 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 OTOP3Q7RTS5 596 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 ATP6V1C2Q8NEY4 427 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 OR8K5Q8NH50 307 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 TRAF4Q9BUZ4 470 aaPredicted RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 YIPF2Q9BWQ6 316 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 EMC7Q9NPA0 242 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 SMOXQ9NWM0 555 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 EPHA6Q9UF33 1036 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 NACAE9PAV3 2078 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 OR6C70A6NIJ9 312 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 BANF1O75531 89 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 RFPL3O75679 317 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 OR1D2P34982 312 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 BNIP3Q12983 259 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 UPP1Q16831 310 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 GAREM2Q75VX8 874 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 ABHD11Q8NFV4 315 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 ZFPM2Q8WW38 1151 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 PIWIL1Q96J94 861 aaKnown RBP8.46□□□□□ -1.06
COL6A5-202ENST00000312481 FIZ1Q96SL8 496 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 SLC35A3Q9Y2D2 325 aa8.46□□□□□ -1.06
COL6A5-202ENST00000312481 RBBP9O75884 186 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CKMT2P17540 419 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SOX10P56693 466 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 MSS51Q4VC12 460 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SHFQ7M4L6 423 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 TRIM46Q7Z4K8 759 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SPRED1Q7Z699 444 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 STOML3Q8TAV4 291 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 B3GNT5Q9BYG0 378 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 RASGRP1O95267 797 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 S1PR4O95977 384 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 CDK1P06493 297 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 G6PDP11413 515 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 TAGLN2P37802 199 aaKnown RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 GPR176Q14439 515 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 MICAQ29983 383 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 PAN2Q504Q3 1202 aaKnown RBP8.45□□□□□ -1.06
COL6A5-202ENST00000312481 UTS2BQ765I0 119 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 TAF8Q7Z7C8 310 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 SYNPOQ8N3V7 929 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 HORMAD2Q8N7B1 307 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 GRIN3AQ8TCU5 1115 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 RNF128Q8TEB7 428 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF354BQ96LW1 612 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 MYADMQ96S97 322 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 DPYSL5Q9BPU6 564 aa8.45□□□□□ -1.06
COL6A5-202ENST00000312481 MROQ9BYG7 248 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms