RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 A8MUA0 341 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 GAPDHSO14556 408 aaPredicted RBP12.1□□□□□ -0.47
RETREG3-201ENST00000309428 PRSS23O95084 383 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 PAK4O96013 591 aaPredicted RBP12.1□□□□□ -0.47
RETREG3-201ENST00000309428 NPPAP01160 153 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 BCHEP06276 602 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 CLEC2LP0C7M8 214 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 DGKGP49619 791 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 ZNF81P51508 661 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 CRISP3P54108 245 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 ITGA1P56199 1179 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 ATG9BQ674R7 924 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 NOXA1Q86UR1 476 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 GLCCI1Q86VQ1 547 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 MARCH9Q86YJ5 346 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 Q8N402 240 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 GAL3ST1Q99999 423 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 TMEM106CQ9BVX2 250 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 HOXD1Q9GZZ0 328 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 IL21Q9HBE4 155 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 RLIMQ9NVW2 624 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 TAC3Q9UHF0 121 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 H7BY64 318 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 PRKRAO75569 313 aaKnown RBP12.1□□□□□ -0.47
RETREG3-201ENST00000309428 EBLN1P0CF75 366 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 XKP51811 444 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 SUZ12Q15022 739 aaKnown RBP12.1□□□□□ -0.47
RETREG3-201ENST00000309428 GPAT3Q53EU6 434 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 CSGALNACT1Q8TDX6 532 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 GATAD2BQ8WXI9 593 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 SLC9A6Q92581 669 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 PRAP1Q96NZ9 151 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 TTLL2Q9BWV7 592 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 POPDC3Q9HBV1 291 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 AREL1O15033 823 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 ORC5O43913 435 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 PRAMEF4O60810 478 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 ACP5P13686 325 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 LAG3P18627 525 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 NOS3P29474 1203 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 CLCN4P51793 760 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 CDK6Q00534 326 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 RPA4Q13156 261 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 PRAMEF9Q5VWM5 478 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 TPGS2Q68CL5 300 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 ZNF438Q7Z4V0 828 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 ENTHD1Q8IYW4 607 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 OR7G1Q8NGA0 311 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 OR2A12Q8NGT7 310 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 KLHL6Q8WZ60 621 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 RACGAP1Q9H0H5 632 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 NANSQ9NR45 359 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 CMAHPQ9Y471 501 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 INMT-MINDY4F8WBC2 141 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 POP7O75817 140 aaKnown RBP12.09□□□□□ -0.47
RETREG3-201ENST00000309428 ADORA3P0DMS8 318 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 SSTR2P30874 369 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 CSRP3P50461 194 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 SUOXP51687 545 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 AP2S1P53680 142 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-201ENST00000309428 E2F2Q14209 437 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 ZNF551Q7Z340 670 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-201ENST00000309428 FGD2Q7Z6J4 655 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 YIPF7Q8N8F6 280 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 RASGEF1AQ8N9B8 481 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 WDR48Q8TAF3 677 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 DPCDQ9BVM2 203 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-201ENST00000309428 CCDC59Q9P031 241 aaKnown RBP12.09□□□□□ -0.47
RETREG3-201ENST00000309428 GTF2A1LQ9UNN4 478 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 MAPRE3Q9UPY8 281 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 METTL15A6NJ78 407 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 PCDH17O14917 1159 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 ATG13O75143 517 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 UGT2B17O75795 530 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 CLTBP09497 229 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 SDC2P34741 201 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 SOX9P48436 509 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 SRSF11Q05519 484 aaKnown RBP12.09□□□□□ -0.47
RETREG3-201ENST00000309428 GRIK2Q13002 908 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 RAB33AQ14088 237 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 FLYWCH1Q4VC44 716 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 CRB2Q5IJ48 1285 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 PSRC1Q6PGN9 363 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-201ENST00000309428 RASSF6Q6ZTQ3 369 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 USP51Q70EK9 711 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 MSRB3Q8IXL7 192 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 MFSD4AQ8N468 514 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 BEST4Q8NFU0 473 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 TM9SF2Q99805 663 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 TMEM175Q9BSA9 504 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 GORASP2Q9H8Y8 452 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 RDH8Q9NYR8 311 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 SCN5AQ14524 2016 aa12.09□□□□□ -0.47
RETREG3-201ENST00000309428 PPM1DO15297 605 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 DHFRP00374 187 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 AOAHP28039 575 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 PPP2R1BP30154 601 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 RYKP34925 604 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 AVPR1BP47901 424 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 MAN2A2P49641 1150 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms