RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Col1a1P11087 1453 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ssxb6A2BI74 170 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 4930402K13RikB1AW18 415 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ptrhd1D3Z4S3 140 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 C2cd6E9Q152 557 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mex3aG3UYU0 520 aaKnown RBP9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Vmn2r97K7N6Z2 861 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 CyctP00015 105 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 GlulP15105 373 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Stfa2P35174 103 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Bcl2a1cQ0P538 128 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 4933427I04RikQ3V053 235 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr698Q7TRN4 311 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dnajb13Q80Y75 316 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Reep1Q8BGH4 201 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ctdsp2Q8BX07 270 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm11541Q8C4D8 108 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Amer2Q8CCJ4 672 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc35e1Q8CD26 409 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Scamp1Q8K021 338 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 HnrnplQ8R081 586 aaKnown RBP9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Acer2Q8VD53 275 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1151Q8VFQ8 308 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1494Q8VGP8 315 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr656Q8VGX9 329 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ces2cQ91WG0 561 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Chil4Q91Z98 402 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dmbx1Q91ZK4 381 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Adarb1Q91ZS8 711 aaKnown RBP9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Sntg1Q925E1 517 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gpr146Q99LE2 333 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Rassf3Q99P51 232 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 MINDY3Q9CV28 444 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Aldh9a1Q9JLJ2 494 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gyg1Q9R062 333 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr49Q9Z1V0 313 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cntnap5cQ0V8T7 1305 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr110A2RT31 317 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dpy19l1A6X919 746 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Skint11A7XV14 364 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Fam71dD3YV92 440 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Vmn2r106E9PY92 862 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Psma3O70435 255 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tk1P04184 233 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cxcl2P10889 100 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Fabp3P11404 133 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Il11ra2P70225 432 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gbx1P82976 418 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 TsnQ62348 228 aaKnown RBP9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Adat3Q6PAT0 349 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr855Q7TRF8 312 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr111Q7TRK1 317 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ankrd45Q810N6 248 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Nipal1Q8BMW7 416 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Lrch3Q8BVU0 778 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 1700020N01RikQ8CF20 87 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr131Q8VGC8 314 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 NoboxQ8VIH1 527 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Lpcat3Q91V01 487 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Rnf151Q9CQ29 239 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Med11Q9D8C6 117 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cyp2s1Q9DBX6 501 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Sorcs2Q9EPR5 1159 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Trpc5Q9QX29 975 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Jag1Q9QXX0 1218 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Adam24Q9R160 761 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc23a1Q9Z2J0 605 aa9.33□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Pcdh7A0A0A6YY83 1255 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1032A2ATE5 310 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 PtprhE9Q0N2 971 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm6811E9Q3Y8 510 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 NoctO35710 429 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 HcrtO55241 130 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 SgceO70258 437 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cd79bP15530 228 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Stat6P52633 837 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Hoxd13P70217 339 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 QrfprP83861 433 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc39a7Q31125 476 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Foxred1Q3TQB2 487 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Lmf1Q3U3R4 574 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Adam2Q60718 735 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Vsx2Q61412 361 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Lag3Q61790 521 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Zp1Q62005 623 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Glt8d2Q640P4 349 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 PtprjQ64455 1238 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cyp3a16Q64481 504 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Scd4Q6T707 353 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 ScocQ78YZ6 125 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 C8bQ8BH35 589 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cpne4Q8BLR2 557 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ankmy1Q8C0W1 906 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 C1rbQ8CFG9 706 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 D2hgdhQ8CIM3 535 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Kctd15Q8K0E1 283 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tcf25Q8R3L2 676 aaKnown RBP9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Erlec1Q8VEH8 483 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr633Q8VF02 312 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1033Q8VFK5 310 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms