RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Mrps28Q9CY16 186 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fem1aaQ9Z2G1 654 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Spats1A2RRY8 269 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vmn2r65G3X931 845 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Scarb2O35114 478 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cmtm3Q99LJ5 184 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cdrt4Q9DA64 179 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Chrna9G3X8Z7 479 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 KrtdapQ3V2T4 102 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Krt33bQ61897 404 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tmem198Q8BG75 360 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fzd10Q8BKG4 582 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr836Q8VFJ3 317 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cdhr1Q8VHP6 859 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Col26a1Q91VF6 440 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 VirmaA2AIV2 1811 aaKnown RBP15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Trappc13Q3TIR1 417 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Snx21Q3UR97 363 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Dpep2Q8C255 478 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tspan10Q8VCF5 331 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rcan2Q9JHG2 197 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Capn5O08688 640 aaKnown RBP15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Klrg2Q3UM83 387 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Eml4Q3UMY5 988 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Osbpl11Q8CI95 751 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pole4Q9CQ36 118 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Adh5P28474 374 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ffar3Q3UFD7 319 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ubap2lQ80X50 1107 aaKnown RBP15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rbm12Q8R4X3 992 aaKnown RBP15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 6720489N17RikA0A1Y7VJW0 127 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm10271F6WY25 52 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 AhcyP50247 432 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 CochQ62507 552 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Zfp120Q8BZW4 436 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Phtf2Q8CB19 747 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Spatc1lQ9D9W0 342 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Elovl2Q9JLJ4 292 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm36210A0A1B0GS00 229 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pcdh10E9PXQ7 1057 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Zfp715G3X9T1 886 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Chrna1P04756 457 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ddx4Q61496 702 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Dlx3Q64205 287 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Lamp3Q7TST5 411 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Zfand1Q8BFR6 268 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Il17rdQ8JZL1 738 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 D8Ertd738eQ8R1F0 94 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 EtfaQ99LC5 333 aaKnown RBP15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tmem35aQ9D328 167 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rrp8Q9DB85 457 aaKnown RBP15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Sec61a2Q9JLR1 476 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 NagaQ9QWR8 415 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Clec4eQ9R0Q8 214 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Psmb3Q9R1P1 205 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 RictorQ6QI06 1708 aa15.99■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Kbtbd7G5E8C2 690 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr190K7N5T5 307 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 E2f3O35261 457 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rab8aP55258 207 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Slc43a2Q8CGA3 568 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Mtcl1Q3UHU5 1945 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 TmppeD3Z286 447 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vmn2r13L7N1X2 831 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 SgceO70258 437 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 WasP70315 520 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Mc1rQ01727 315 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fam198bQ3UPI1 517 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gjd4Q8BSD4 364 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cmss1Q9CZT6 276 aaKnown RBP15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fam174aQ9D3L0 190 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fam69aQ9D6I7 428 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ppp1r35Q9D8C8 260 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tmem43Q9DBS1 400 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr716Q9EPG6 314 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm5538W4VSP6 401 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ltn1Q6A009 1767 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rhox2gL7MUB9 191 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Klf10O89091 479 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Hbb-bh1P04444 147 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr907Q7TRC7 310 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pus10Q9D3U0 527 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 PgcQ9D7R7 392 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 TheglQ9DA15 459 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Q9DAY5 185 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tjp1P39447 1745 aaKnown RBP15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fpr-rs4A4FUQ5 323 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr1080Q7TR67 313 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Calhm4Q8CE93 315 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Slc22a12Q8CFZ5 553 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Eef1e1Q9D1M4 174 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Syt5Q9R0N5 386 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gsg1l2M0QWL6 290 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Mmp15O54732 657 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Nol9Q3TZX8 714 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ppp1r15bQ8BFW3 697 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Chrm3Q9ERZ3 589 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 IckQ9JKV2 629 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cd320Q9Z1P5 260 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Stc1O55183 247 aa15.98■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms