RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Get4Q9D1H7 327 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 TrehQ9JLT2 576 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 PnckQ9QYK9 343 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Kiaa0100Q5SYL3 2234 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Myo10F8VQB6 2062 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Vmn1r31L7N2F1 303 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Cx3cl1O35188 395 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Fgf10O35565 209 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Pcdh12O55134 1180 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Pou3f2P31360 445 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Arcn1Q5XJY5 511 aaKnown RBP10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Ripk1Q60855 656 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Mon1aQ6PDG8 556 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Tas2r140Q7TQA4 312 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Arhgap11aQ80Y19 987 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Slitrk2Q810C0 846 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Katnb1Q8BG40 658 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Hist1h2aaQ8CGP4 129 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Fndc5Q8K4Z2 209 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Cacul1Q8R0X2 377 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Adap2Q8R2V5 381 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Olfr854Q8VFF1 315 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Olfr820Q8VFU5 312 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Olfr649Q8VGW1 312 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Cox4i2Q91W29 172 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Zswim1Q9CWV7 455 aaKnown RBP10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 ArskQ9D2L1 553 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Fank1Q9DAM9 344 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Tmem8aQ9ESN3 769 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Pappa2E9PZ87 1789 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Sult6b2B7ZWN4 290 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Zfp282E9PVC2 666 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Vmn1r77E9PY60 306 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Olfr620E9PZ66 313 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 S100a2J3QMC7 104 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Sp100O35892 482 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 DmpkP54265 631 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Rps13P62301 151 aaKnown RBP10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 CrtamQ149L7 389 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Rsrp1Q3UC65 298 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Gm5113Q3UGK8 141 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Pydc3Q3V3Q4 588 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Cd34Q64314 382 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Ranbp3lQ6PDH4 491 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Trnp1Q80ZI1 223 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Slc7a4Q8BLQ7 635 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Trmt6Q8CE96 497 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Nfatc4Q8K120 901 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Vmn1r192Q8K4C9 300 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Tor2aQ8R1J9 321 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Sgip1Q8VD37 806 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Zcchc14Q8VIG0 956 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Lsm7Q9CQQ8 103 aaKnown RBP10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Exosc7Q9D0M0 291 aaKnown RBP10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Nol3Q9D1X0 220 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 RtcAQ9D7H3 366 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Tmem86aQ9D8N3 241 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Tbc1d20Q9D9I4 402 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 IL36RNQ9QYY1 156 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Vps29Q9QZ88 182 aa10.26□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Kmt2eQ3UG20 1868 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Olfr605E9Q838 314 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Zfp989H3BLB0 661 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Man2b1O09159 1013 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Slc6a11P31650 627 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Ctbp2P56546 445 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Serpina3mQ03734 418 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Zfp987Q32P14 633 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 HecaQ3V1N5 544 aaKnown RBP10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 CilpQ66K08 1184 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Efcab3Q80X60 432 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Clrn3Q8BHH8 226 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Acp6Q8BP40 418 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Zcchc3Q8BPK2 400 aaKnown RBP10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Ptges2Q8BWM0 384 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Paip1Q8VE62 400 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Asb17Q8VHP9 295 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Imp4Q8VHZ7 291 aaKnown RBP10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 NifkQ91VE6 317 aaKnown RBP10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Med28Q920D3 178 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Lrch4Q921G6 680 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Tada1Q99LM9 335 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Tcam1Q99NB3 548 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Izumo2Q9DA16 220 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Olfr630Q9EQQ7 319 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Cmtm7Q9ESD6 167 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Avpr1bQ9WU02 421 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Pate3B3GLJ3 98 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Gsg1lD3Z7H4 322 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 4930558K02RikE0CXC6 182 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Efna3O08545 230 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 CyctP00015 105 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 HbzP06467 142 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 CryaaP24622 196 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Fabp7P51880 132 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Isl1P61372 349 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 EvlP70429 414 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 FcamrQ2TB54 535 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Pin1rt1Q3ULQ2 159 aa10.25□□□□□ -0.77
Rnf40-201ENSMUST00000033088 Prss53Q571E5 552 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms