RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 EMC8O43402 210 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 DFNA5O60443 496 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 DLX3O60479 287 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 MAGP20916 626 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 UQCRC2P22695 453 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 GGT2P36268 569 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 GGT5P36269 586 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 GPX6P59796 221 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ST3GAL4Q11206 333 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 TUBB3Q13509 450 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 KIR2DS5Q14953 304 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 MANEAQ5SRI9 462 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 STX12Q86Y82 276 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 PQLC3Q8N755 202 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 SNIP1Q8TAD8 396 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 BBS10Q8TAM1 723 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 POLR2J2Q9GZM3 115 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 NUMBLQ9Y6R0 609 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 VILLO15195 856 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 LATO43561 262 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 CHRM5P08912 532 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 XRCC1P18887 633 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 NR4A1P22736 598 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 TPTEP56180 551 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 SCN1BQ07699 218 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 TRAM2Q15035 370 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 CST9Q5W186 159 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ZBTB8BQ8NAP8 495 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ACVR1CQ8NER5 493 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 OR4K1Q8NGD4 311 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 RAB8BQ92930 207 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 SFXN2Q96NB2 322 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 URB1O60287 2271 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 AQP12BA6NM10 295 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 FAM72CH0Y354 149 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 L7N2F9 121 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 AK1P00568 194 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ITGB1P05556 798 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 HK1P19367 917 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ARPC4P59998 168 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 VAMP2P63027 116 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 RPA4Q13156 261 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 NFE2L1Q14494 772 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 SFT2D3Q587I9 215 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 IDNKQ5T6J7 187 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 FAM72AQ5TYM5 149 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 FAM72DQ6L9T8 149 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 HMBOX1Q6NT76 420 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF227Q86WZ6 799 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 FAM72BQ86X60 149 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 AQP12AQ8IXF9 295 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ACOT12Q8WYK0 555 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ARL5BQ96KC2 179 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 TRIB3Q96RU7 358 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 COPS4Q9BT78 406 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 LIPT1Q9Y234 373 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ITM2AO43736 263 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 RAB36O95755 333 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 G6PDP11413 515 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ITGB7P26010 798 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 SOX9P48436 509 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 EPHA4P54764 986 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 SHC2P98077 582 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 MLF2Q15773 248 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 LRRC26Q2I0M4 334 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 LARP4Q71RC2 724 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 SCRN2Q96FV2 425 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ZFP3Q96NJ6 502 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 TSSK6Q9BXA6 273 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 YTHDF1Q9BYJ9 559 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 STOML2Q9UJZ1 356 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 TBC1D24Q9ULP9 559 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 NHSQ6T4R5 1651 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 FAM172BPA6NC97 362 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 NOBOXO60393 691 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 CH25HO95992 272 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 IL3P08700 152 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 ADORA3P0DMS8 318 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 HMGCLP35914 325 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PITPNAQ00169 270 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 MOGSQ13724 837 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 RBM48Q5RL73 367 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 ENPP6Q6UWR7 440 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 ASB18Q6ZVZ8 466 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 CENPSQ8N2Z9 138 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 AGBL5Q8NDL9 886 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 LRRC58Q96CX6 371 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 MRPL38Q96DV4 380 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 SCGB3A2Q96PL1 93 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 CDH20Q9HBT6 801 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 ERVK-18Q9QC07 812 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 FEZF1A0PJY2 475 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 HTR1AP08908 422 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF16P17020 682 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 DCKP27707 260 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 HOXC13P31276 330 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 CLDN2P57739 230 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 TUBA4AP68366 448 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms