RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SERTAD2Q14140 314 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 E2F2Q14209 437 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 TBCCQ15814 346 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 RTL4Q6ZR62 310 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 RGS9BPQ6ZS82 235 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 LRRC70Q7Z2Q7 622 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 SLC22A16Q86VW1 577 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 CCDC71Q8IV32 467 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 ACOT4Q8N9L9 421 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 BBOF1Q8ND07 529 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 SRFBP1Q8NEF9 429 aaKnown RBP19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 OR8K3Q8NH51 312 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 CD244Q9BZW8 370 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 DPH5Q9H2P9 285 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 PNPLA3Q9NST1 481 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 FAM159BA6NKW6 160 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 FANCGO15287 622 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 TOXO94900 526 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 ETHE1O95571 254 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 C1QAP02745 245 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 S100BP04271 92 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 CNR1P21554 472 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 HIST1H1TP22492 207 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 CASP2P42575 452 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 RAB10P61026 200 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 PMPCAQ10713 525 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 TESK1Q15569 626 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 GXYLT1Q4G148 440 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 NDUFAF5Q5TEU4 345 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 GK5Q6ZS86 529 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 TMEM251Q8N6I4 163 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 GOLM1Q8NBJ4 401 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 OR5M9Q8NGP3 310 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 OR5M3Q8NGP4 307 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 ZNF721Q8TF20 911 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 ANKRD9Q96BM1 317 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 FAM173AQ9BQD7 235 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 ALG9Q9H6U8 611 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 PRM3Q9NNZ6 103 aa19.23■□□□□ 0.67
TRAPPC3-208ENST00000616074 C2CD3Q4AC94 2353 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 SAP18O00422 153 aaKnown RBP19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 SCELO95171 688 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 TGFB1P01137 390 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 IGHG3P01860 377 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 PCNAP12004 261 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 MSX1P28360 303 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 MAGEA5P43359 124 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 DNASE1L1P49184 302 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 DLG1Q12959 904 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 FAM47EQ6ZV65 393 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 LAS2Q8IYD9 372 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 FAM109AQ8N4B1 249 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 OR5L2Q8NGL0 311 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 SMC6Q96SB8 1091 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 SORBS1Q9BX66 1292 aaKnown RBP19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 GRPEL1Q9HAV7 217 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 IL1RL2Q9HB29 575 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 SACM1LQ9NTJ5 587 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 NUDT4Q9NZJ9 180 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 WHRNQ9P202 907 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 SPACA6W5XKT8 324 aa19.22■□□□□ 0.67
TRAPPC3-208ENST00000616074 MED13LQ71F56 2210 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 EIF3HO15372 352 aaKnown RBP eCLIP19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 FGF17O60258 216 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 CCL3P10147 92 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 CPN2P22792 545 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 SSR2P43308 183 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 RIPPLY3P57055 190 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 GPX6P59796 221 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 IGLV3-21P80748 117 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 FOXO1Q12778 655 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 CALCOCO2Q13137 446 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 AP5B1Q2VPB7 878 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 TMEM35AQ53FP2 167 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 MED27Q6P2C8 311 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 OPN5Q6U736 354 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 C3orf62Q6ZUJ4 267 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 ACAD11Q709F0 780 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 CYS1Q717R9 158 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 TRILQ7L0X0 811 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 CMC1Q7Z7K0 106 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 OR4N5Q8IXE1 308 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 RNF175Q8N4F7 328 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 UBE2E3Q969T4 207 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 SGCZQ96LD1 299 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 ERP44Q9BS26 406 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 PHACTR1Q9C0D0 580 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 KCNJ16Q9NPI9 418 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 TUBA8Q9NY65 449 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 TNFRSF10DQ9UBN6 386 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 RNF14Q9UBS8 474 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 COPS7AQ9UBW8 275 aa19.21■□□□□ 0.67
TRAPPC3-208ENST00000616074 NCKAP5O14513 1909 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 OR14I1A6ND48 311 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 SUPT3HB4E1H0 165 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 UBXN8O00124 270 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 SUPT3HO75486 399 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 FAM155BO75949 473 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 P04436 131 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 CELA3AP09093 270 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms