RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 YIPF2Q9BWQ6 316 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 SHCBP1LQ9BZQ2 653 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 RIC8BQ9NVN3 520 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 TEX10Q9NXF1 929 aaPredicted RBP12.59□□□□□ -0.39
CDH1-204ENST00000562118 PTGDR2Q9Y5Y4 395 aa12.59□□□□□ -0.39
CDH1-204ENST00000562118 WDR91A4D1P6 747 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 SLC28A1O00337 649 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 PEX12O00623 359 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 CLDN4O14493 209 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 B4GALT2O60909 372 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 KLK1P06870 262 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 NR2F6P10588 404 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 CPN2P22792 545 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 PPP2R1BP30154 601 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 GALNSP34059 522 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 BUD31P41223 144 aaPredicted RBP12.58□□□□□ -0.4
CDH1-204ENST00000562118 PPP2R2AP63151 447 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 STX3Q13277 289 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 NSDHLQ15738 373 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 HHATQ5VTY9 493 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 C18orf63Q68DL7 685 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 IGFL2Q6UWQ7 119 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 CLNKQ7Z7G1 428 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 TRIM42Q8IWZ5 723 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 METTL21AQ8WXB1 218 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 ZNF764Q96H86 408 aaPredicted RBP12.58□□□□□ -0.4
CDH1-204ENST00000562118 PTCHD1Q96NR3 888 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 SMAD5Q99717 465 aaKnown RBP12.58□□□□□ -0.4
CDH1-204ENST00000562118 ACBD3Q9H3P7 528 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 RPF2Q9H7B2 306 aaKnown RBP12.58□□□□□ -0.4
CDH1-204ENST00000562118 PRTFDC1Q9NRG1 225 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 THAP1Q9NVV9 213 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 VTI1BQ9UEU0 232 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 WBP11Q9Y2W2 641 aaKnown RBP12.58□□□□□ -0.4
CDH1-204ENST00000562118 TMED5Q9Y3A6 229 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 PCDHGB7Q9Y5F8 929 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 PCDHA9Q9Y5H5 950 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 SPACA6W5XKT8 324 aa12.58□□□□□ -0.4
CDH1-204ENST00000562118 SAGE2PA6NJ88 616 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 ARGFXA6NJG6 315 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 PIP5K1BO14986 540 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 PCDH7O60245 1069 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 FGF17O60258 216 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 HSPA4LO95757 839 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 CHEK2O96017 543 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 GBAP04062 536 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 JUNP05412 331 aaKnown RBP12.57□□□□□ -0.4
CDH1-204ENST00000562118 SERPINA7P05543 415 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 SOX11P35716 441 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 ACSM2AQ08AH3 577 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 CHAF1BQ13112 559 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 SERTAD2Q14140 314 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 CEBPEQ15744 281 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 SMU1Q2TAY7 513 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 SFT2D3Q587I9 215 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 CCNYL2Q5T2Q4 361 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 NDUFAF5Q5TEU4 345 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 ACSM2BQ68CK6 577 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 OR52E8Q6IFG1 317 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 H3F3CQ6NXT2 135 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 CYP20A1Q6UW02 462 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 SCIMPQ6UWF3 145 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 RGS9BPQ6ZS82 235 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 GALNT16Q8N428 558 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 M1APQ8TC57 530 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 ELP5Q8TE02 316 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 PSMF1Q92530 271 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 C3orf30Q96M34 536 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 SEMA4CQ9C0C4 833 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 ILKAPQ9H0C8 392 aaPredicted RBP12.57□□□□□ -0.4
CDH1-204ENST00000562118 MMP25Q9NPA2 562 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 ADAP2Q9NPF8 381 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 ATP13A2Q9NQ11 1180 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 WDR70Q9NW82 654 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 C1orf109Q9NX04 203 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 EHD3Q9NZN3 535 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 FBXW2Q9UKT8 454 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 COL6A6A6NMZ7 2263 aa12.57□□□□□ -0.4
CDH1-204ENST00000562118 NSG1A0A0A6YYJ2 146 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 C1orf226A1L170 272 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 RGS14O43566 566 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 TBX19O60806 448 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 PRKRAO75569 313 aaKnown RBP12.56□□□□□ -0.4
CDH1-204ENST00000562118 CRCPO75575 148 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 DNAJB5O75953 348 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 ICAM2P13598 275 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 RPL14P50914 215 aaKnown RBP12.56□□□□□ -0.4
CDH1-204ENST00000562118 HK2P52789 917 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 MAPK12P53778 367 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 SLC26A5P58743 744 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 EEF1A2Q05639 463 aaKnown RBP12.56□□□□□ -0.4
CDH1-204ENST00000562118 ZNF763Q0D2J5 394 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 KCNAB2Q13303 367 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 MYBPC3Q14896 1274 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 ELAVL1Q15717 326 aaKnown RBP12.56□□□□□ -0.4
CDH1-204ENST00000562118 EXT1Q16394 746 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 SPRED3Q2MJR0 410 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 ATG16L1Q676U5 607 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 FAM71E1Q6IPT2 247 aa12.56□□□□□ -0.4
CDH1-204ENST00000562118 TCTN3Q6NUS6 607 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms