RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SH2D4BQ5SQS7 431 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 CES4AQ5XG92 561 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 ACSM2BQ68CK6 577 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 Q6ZSR9 355 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 TRIM42Q8IWZ5 723 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 KBTBD2Q8IY47 623 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 C1orf52Q8N6N3 182 aaKnown RBP13.57□□□□□ -0.24
DDX54-203ENST00000546869 ANKRD42Q8N9B4 389 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 ANKRD9Q96BM1 317 aaPredicted RBP13.57□□□□□ -0.24
DDX54-203ENST00000546869 TM4SF18Q96CE8 201 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 APIPQ96GX9 242 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 SMAD5Q99717 465 aaKnown RBP13.57□□□□□ -0.24
DDX54-203ENST00000546869 LHPPQ9H008 270 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 TUBB1Q9H4B7 451 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 WDR41Q9HAD4 459 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 ZNF160Q9HCG1 818 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 PFDN4Q9NQP4 134 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 C5AR2Q9P296 337 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 ZDHHC2Q9UIJ5 367 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 G3BP2Q9UN86 482 aaKnown RBP13.57□□□□□ -0.24
DDX54-203ENST00000546869 RAP2CQ9Y3L5 183 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 CACNA1GO43497 2377 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 UQCRHLA0A096LP55 91 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 C1orf226A1L170 272 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 KLF11O14901 512 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 ATP8B1O43520 1251 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 ITM2AO43736 263 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 HSPA4LO95757 839 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 GBAP04062 536 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 UQCRHP07919 91 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 PRR35P0CG20 571 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 NR2F6P10588 404 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 BGNP21810 368 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 GALNSP34059 522 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 SLC1A6P48664 564 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 RAE1P78406 368 aaKnown RBP13.56□□□□□ -0.24
DDX54-203ENST00000546869 EEF1A2Q05639 463 aaKnown RBP13.56□□□□□ -0.24
DDX54-203ENST00000546869 ACTN3Q08043 901 aaPredicted RBP13.56□□□□□ -0.24
DDX54-203ENST00000546869 STX4Q12846 297 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 CHAF1BQ13112 559 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 IMPG1Q17R60 797 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 FAM219BQ5XKK7 198 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 C18orf63Q68DL7 685 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 PAPD4Q6PIY7 484 aaKnown RBP13.56□□□□□ -0.24
DDX54-203ENST00000546869 EFCAB3Q8N7B9 438 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 FDCSPQ8NFU4 85 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 C9orf43Q8TAL5 461 aaPredicted RBP13.56□□□□□ -0.24
DDX54-203ENST00000546869 PAIP2Q9BPZ3 127 aaKnown RBP13.56□□□□□ -0.24
DDX54-203ENST00000546869 SLC25A23Q9BV35 468 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 ALOXE3Q9BYJ1 711 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 C20orf27Q9GZN8 174 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 ILKAPQ9H0C8 392 aaPredicted RBP13.56□□□□□ -0.24
DDX54-203ENST00000546869 SLC25A18Q9H1K4 315 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 ZNF552Q9H707 407 aaPredicted RBP13.56□□□□□ -0.24
DDX54-203ENST00000546869 MMP25Q9NPA2 562 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 THAP1Q9NVV9 213 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 ZNF446Q9NWS9 450 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 TMED5Q9Y3A6 229 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 PCDHA9Q9Y5H5 950 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 LOC400499M0QZD8 3231 aa13.56□□□□□ -0.24
DDX54-203ENST00000546869 NUP210LQ5VU65 1888 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 SAGE2PA6NJ88 616 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 TGFBR3LH3BV60 316 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 CDK2AP1O14519 115 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 SNNO75324 88 aaPredicted RBP13.55□□□□□ -0.24
DDX54-203ENST00000546869 GPR75O95800 540 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 AIFM1O95831 613 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 DRD2P14416 443 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 ITGA3P26006 1051 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 TIA1P31483 386 aaKnown RBP eCLIP13.55□□□□□ -0.24
DDX54-203ENST00000546869 RPL14P50914 215 aaKnown RBP13.55□□□□□ -0.24
DDX54-203ENST00000546869 GPR143P51810 404 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 BST1Q10588 318 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 ELAVL1Q15717 326 aaKnown RBP13.55□□□□□ -0.24
DDX54-203ENST00000546869 SOWAHCQ53LP3 525 aaPredicted RBP13.55□□□□□ -0.24
DDX54-203ENST00000546869 XKR7Q5GH72 579 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 SPDYAQ5MJ70 313 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 NDUFAF5Q5TEU4 345 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 IRAK1BP1Q5VVH5 260 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 ATG16L1Q676U5 607 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 OR52E8Q6IFG1 317 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 H3F3CQ6NXT2 135 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 SCIMPQ6UWF3 145 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 IGFL2Q6UWQ7 119 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 IGFL3Q6UXB1 125 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 PARP9Q8IXQ6 854 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 TMEM132CQ8N3T6 1108 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 NFAM1Q8NET5 270 aaPredicted RBP13.55□□□□□ -0.24
DDX54-203ENST00000546869 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.55□□□□□ -0.24
DDX54-203ENST00000546869 DNAJB14Q8TBM8 379 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 ELP5Q8TE02 316 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 TWIST2Q8WVJ9 160 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 PSMF1Q92530 271 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 THOC3Q96J01 351 aaKnown RBP13.55□□□□□ -0.24
DDX54-203ENST00000546869 FCRL1Q96LA6 429 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 LMF1Q96S06 567 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 SORT1Q99523 831 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 FAIM2Q9BWQ8 316 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 MANSC1Q9H8J5 431 aa13.55□□□□□ -0.24
DDX54-203ENST00000546869 ADAP2Q9NPF8 381 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms