RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ZNF367Q7RTV3 350 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 SPRED2Q7Z698 418 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 DENND6BQ8NEG7 585 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 WDR20Q8TBZ3 569 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 ASB15Q8WXK1 588 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 PAWRQ96IZ0 340 aaKnown RBP14.62□□□□□ -0.07
CNOT9-208ENST00000542068 HHATLQ9HCP6 504 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 GIMAP4Q9NUV9 329 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 TMEM98Q9Y2Y6 226 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 KCNE2Q9Y6J6 123 aa14.62□□□□□ -0.07
CNOT9-208ENST00000542068 ANTXRLA6NF34 631 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 TLR4O00206 839 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 RTCAO00442 366 aaKnown RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 IL7P13232 177 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 NFE2L1Q14494 772 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 TEAD4Q15561 434 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 ATCAYQ86WG3 371 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 CHCHD4Q8N4Q1 142 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 C12orf76Q8N812 135 aaPredicted RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 SYT14Q8NB59 555 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 C17orf50Q8WW18 174 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 PIP5K1AQ99755 562 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 CERS4Q9HA82 394 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 PLCXD1Q9NUJ7 323 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 STOX2Q9P2F5 926 aaPredicted RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 EXO1Q9UQ84 846 aaKnown RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 GPSM3Q9Y4H4 160 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 C5orf58C9J3I9 102 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 TLX2O43763 284 aaPredicted RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 BCHEP06276 602 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 TSPAN19P0C672 248 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 ZNF8P17098 575 aaPredicted RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 HOXB6P17509 224 aaKnown RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 GABRB1P18505 474 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 PSMA1P25786 263 aaKnown RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 VEGFBP49765 207 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 LSM11P83369 360 aaKnown RBP eCLIP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 SPHARQ15513 63 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 TIMM50Q3ZCQ8 353 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 GGTA1PQ4G0N0 100 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 PDZK1Q5T2W1 519 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 ANXA8L1Q5VT79 327 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 COMMD6Q7Z4G1 85 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 CADM2Q8N3J6 435 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 RASGEF1AQ8N9B8 481 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 ZSWIM3Q96MP5 696 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 ZNF282Q9UDV7 671 aaPredicted RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 SMLR1H3BR10 107 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 K7ESM1 405 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 IFNW1P05000 195 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 CYP2A6P11509 494 aaPredicted RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 CTNNB1P35222 781 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 TIE1P35590 1138 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 VIPR2P41587 438 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 GPR1P46091 355 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 SLBPQ14493 270 aaKnown RBP eCLIP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 TCEAL5Q5H9L2 206 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 TMEM215Q68D42 235 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 OR4C15Q8NGM1 316 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 C1GALT1C1Q96EU7 318 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 CRELD1Q96HD1 420 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 ST6GAL2Q96JF0 529 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 OR2B2Q9GZK3 357 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 OSGEPL1Q9H4B0 414 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 TRPV5Q9NQA5 729 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 MIEF1Q9NQG6 463 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 CCDC177Q9NQR7 707 aaPredicted RBP14.61□□□□□ -0.07
CNOT9-208ENST00000542068 COMMD3Q9UBI1 195 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 ASF1AQ9Y294 204 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 CLCA3PQ9Y6N3 262 aa14.61□□□□□ -0.07
CNOT9-208ENST00000542068 CCDC182A6NF36 153 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 MRPS14O60783 128 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 MMP20O60882 483 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 ATG13O75143 517 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 CD72P21854 359 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 TIA1P31483 386 aaKnown RBP eCLIP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 DBPQ10586 325 aaPredicted RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 PRSS53Q2L4Q9 553 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 TYW3Q6IPR3 259 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 CCDC149Q6ZUS6 474 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 ARMCX6Q7L4S7 300 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 TP53INP1Q96A56 240 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 GFM1Q96RP9 751 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 NXF2Q9GZY0 626 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 RPRD1BQ9NQG5 326 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 TMCC3Q9ULS5 477 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 PLXNA3P51805 1871 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 FABP12A6NFH5 140 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 OR6C70A6NIJ9 312 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 MYL12BO14950 172 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 TSC22D2O75157 780 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 CSO75390 466 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 RHOP08100 348 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 IFI30P13284 250 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 RORCP51449 518 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 WDR5P61964 334 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 FNDC3BQ53EP0 1204 aaKnown RBP14.6□□□□□ -0.07
CNOT9-208ENST00000542068 CASP12Q6UXS9 341 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 USP30Q70CQ3 517 aa14.6□□□□□ -0.07
CNOT9-208ENST00000542068 CRIPAKQ8N1N5 446 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms