RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 MAPRE3Q9UPY8 281 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TDRKHQ9Y2W6 561 aaKnown RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TESMINQ9Y4I5 508 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PCDHGB3Q9Y5G1 929 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GMPPBQ9Y5P6 360 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GPC6Q9Y625 555 aaPredicted RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 KNL1Q8NG31 2342 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 VPS13AQ96RL7 3174 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CENPVL1A0A0U1RR11 272 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TRBC2A0A5B9 178 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 KRBA1A5PL33 1030 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 EPOPA6NHQ4 379 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 MYO1GB0I1T2 1018 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CLDN25C9JDP6 229 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ANHXE9PGG2 379 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RTCAO00442 366 aaKnown RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 KPNA3O00505 521 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TOR1BO14657 336 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SLC9A3R1O14745 358 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PCDH17O14917 1159 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 AQP9O43315 295 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 KLF4O43474 513 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 FOXS1O43638 330 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 NARSO43776 548 aaKnown RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TLL1O43897 1013 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 VEGFDO43915 354 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SSX4O60224 188 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TPST2O60704 377 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 MMP20O60882 483 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CSO75390 466 aaKnown RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PRKRAO75569 313 aaKnown RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 KCNK2O95069 426 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 LYPD3O95274 346 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 FKBP9O95302 570 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 NFATC1O95644 943 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ADAP00813 363 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 VIPP01282 170 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 BCHEP06276 602 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CHRM4P08173 479 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 IGFBP1P08833 259 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 HBQ1P09105 142 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 HIST1H2AGP0C0S8 130 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 MYOGP15173 224 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ZNF12P17014 697 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 HIST1H2ADP20671 130 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RPS4Y1P22090 263 aaKnown RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 UQCRC2P22695 453 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CHMP24386 653 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 GADD45AP24522 165 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 EEF1B2P24534 225 aaKnown RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PTX3P26022 381 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CALRP27797 417 aaKnown RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PSMB9P28065 219 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 C21orf33P30042 268 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SERPINB1P30740 379 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SOAT1P35610 550 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 GRK3P35626 688 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TRIM23P36406 574 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 UGT2B10P36537 528 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RPL3P39023 403 aaKnown RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 BCL6P41182 706 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CTSKP43235 329 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 KIR2DL1P43626 348 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RECQLP46063 649 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 GSTM5P46439 218 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 OR1E2P47887 323 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 KCNJ5P48544 419 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CASP9P55211 416 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CDH12P55289 794 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 C21orf59P57076 290 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RAB15P59190 212 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CYP4F2P78329 520 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 LSM11P83369 360 aaKnown RBP eCLIP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 EFNB1P98172 346 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CDK6Q00534 326 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RELAQ04206 551 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ZNF91Q05481 1191 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 COL9A2Q14055 689 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 STARD3Q14849 445 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 NR1D2Q14995 579 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ARHGAP19Q14CB8 494 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 HIST2H2ACQ16777 129 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 DUSP6Q16828 381 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 DUSP7Q16829 419 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 MICAQ29983 383 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 INAVAQ3KP66 663 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 LEXMQ3ZCV2 418 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CYP27C1Q4G0S4 372 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SOWAHCQ53LP3 525 aaPredicted RBP3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PAGE2BQ5JRK9 111 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TPRG1LQ5T0D9 272 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CPTPQ5TA50 214 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 DEPDC1Q5TB30 811 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ZNF697Q5TEC3 545 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ANXA8L1Q5VT79 327 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 AGAP7PQ5VUJ5 663 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 METRNLQ641Q3 311 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ZNF425Q6IV72 752 aa3.08□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TCTN3Q6NUS6 607 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms