RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 NLRP11P59045 1033 aaKnown RBP4□□□□□ -1.77
GTF3A-208ENST00000493903 SP3Q02447 781 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 SRSF4Q08170 494 aaKnown RBP4□□□□□ -1.77
GTF3A-208ENST00000493903 EXOSC7Q15024 291 aaKnown RBP4□□□□□ -1.77
GTF3A-208ENST00000493903 ZSWIM7Q19AV6 140 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 XKR6Q5GH73 641 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 FGD3Q5JSP0 725 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 TCEAL6Q6IPX3 200 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 PAQR9Q6ZVX9 377 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 SLC22A16Q86VW1 577 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 C17orf64Q86WR6 236 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 FAM131BQ86XD5 332 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 GPC2Q8N158 579 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 FAM89BQ8N5H3 189 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 CCDC185Q8N715 623 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 LMNTD1Q8N9Z9 388 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 OR7A2PQ8NGA2 310 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 OR56B2PQ8NGI1 322 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 OR13C5Q8NGS8 318 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 OR13C2Q8NGS9 318 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 OR2T3Q8NH03 318 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 RNF139Q8WU17 664 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 TMED6Q8WW62 240 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 BPIFA2Q96DR5 249 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 MARK4Q96L34 752 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 ZBTB18Q99592 522 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 AGPAT1Q99943 283 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 FUNDC2Q9BWH2 189 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 FAM49AQ9H0Q0 323 aaPredicted RBP4□□□□□ -1.77
GTF3A-208ENST00000493903 IL25Q9H293 177 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 SLC26A1Q9H2B4 701 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 MTIF3Q9H2K0 278 aaKnown RBP4□□□□□ -1.77
GTF3A-208ENST00000493903 GAREM1Q9H706 876 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 TBC1D13Q9NVG8 400 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 FLRT3Q9NZU0 649 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 ATP6V1HQ9UI12 483 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 PRDM4Q9UKN5 801 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 ELF5Q9UKW6 265 aaPredicted RBP4□□□□□ -1.77
GTF3A-208ENST00000493903 GRID1Q9ULK0 1009 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 PCDHA7Q9UN72 937 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 FOXJ3Q9UPW0 622 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 SATB2Q9UPW6 733 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 TTC3P53804 2025 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 PTPRTO14522 1441 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 PTCH1Q13635 1447 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 PTPRUQ92729 1446 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 IGLV5-45A0A087WSX0 123 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 MTMR11A4FU01 709 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 SRRM3A6NNA2 597 aaPredicted RBP3.99□□□□□ -1.77
GTF3A-208ENST00000493903 A8MVM7 634 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 HNRNPCL2B2RXH8 293 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 K7EQM0 130 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 DFFBO76075 338 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 OR4F21O95013 312 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 NDUFA7O95182 113 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 IQCF3P0C7M6 154 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 ZCCHC18P0CG32 403 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 RPA2P15927 270 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 MSH3P20585 1137 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 PTPN6P29350 595 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 CDC25AP30304 524 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 ZBTB17Q13105 803 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 DDX39BQ13838 428 aaKnown RBP3.99□□□□□ -1.77
GTF3A-208ENST00000493903 RBM39Q14498 530 aaKnown RBP3.99□□□□□ -1.77
GTF3A-208ENST00000493903 OR1C1Q15619 314 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 TATDN3Q17R31 274 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 USH1GQ495M9 461 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 XKR3Q5GH77 459 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 LCN1P1Q5VSP4 162 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 NIPAL3Q6P499 406 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 ZYG11AQ6WRX3 759 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 C17orf107Q6ZR85 190 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 SLC24A5Q71RS6 500 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 TRMT11Q7Z4G4 463 aaKnown RBP3.99□□□□□ -1.77
GTF3A-208ENST00000493903 GRAMD2AQ8IUY3 354 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 ZC3H3Q8IXZ2 948 aaKnown RBP3.99□□□□□ -1.77
GTF3A-208ENST00000493903 DNAJC22Q8N4W6 341 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 ZNF441Q8N8Z8 693 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 SMG7Q92540 1137 aaKnown RBP3.99□□□□□ -1.77
GTF3A-208ENST00000493903 P3H4Q92791 437 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 RPL36ALQ969Q0 106 aaKnown RBP3.99□□□□□ -1.77
GTF3A-208ENST00000493903 PHF21BQ96EK2 531 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 CXorf58Q96LI9 332 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 ZNF607Q96SK3 696 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 NDUFAF3Q9BU61 184 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 FAM124BQ9H5Z6 455 aaPredicted RBP3.99□□□□□ -1.77
GTF3A-208ENST00000493903 ZNF665Q9H7R5 613 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 ECHDC1Q9NTX5 307 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 OCIAD1Q9NX40 245 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 ZNF319Q9P2F9 582 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 LHX3Q9UBR4 397 aa3.99□□□□□ -1.77
GTF3A-208ENST00000493903 MRTO4Q9UKD2 239 aaKnown RBP3.99□□□□□ -1.77
GTF3A-208ENST00000493903 KDM5CP41229 1560 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 NCOA1Q15788 1441 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 C9orf84Q5VXU9 1444 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 IGHV4OR15-8A0A075B7B6 117 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 A0A1W2PS18 150 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 XKRY2A2RUG3 117 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 NKX6-3A6NJ46 265 aa3.98□□□□□ -1.77
GTF3A-208ENST00000493903 YJEFN3A6XGL0 299 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms