RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PPT2Q9UMR5 302 aa10.54□□□□□ -0.72
COL27A1-204ENST00000477421 TET1Q8NFU7 2136 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 TMX2-CTNND1H3BSU7 103 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 HPRP00739 348 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 OPRL1P41146 370 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 KHKP50053 298 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 SIM1P81133 766 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 EMX1Q04741 257 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 RUNX3Q13761 415 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 LEXMQ3ZCV2 418 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 CCDC92Q53HC0 331 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 C10orf62Q5T681 223 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 LIPKQ5VXJ0 399 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 SHFQ7M4L6 423 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 KLHL6Q8WZ60 621 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 DTD2Q96FN9 168 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 DMRTB1Q96MA1 342 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 GFM1Q96RP9 751 aaKnown RBP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 GPR52Q9Y2T5 361 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 RWDD3Q9Y3V2 267 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 ALPK2Q86TB3 2170 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 FAM227AF5H4B4 570 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 H3BSH0 61 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 GTPBP1O00178 669 aaKnown RBP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 SLC30A4O14863 429 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 ACOX3O15254 700 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 SCN2BO60939 215 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 OR5F1O95221 314 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 HSD3B1P14060 373 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 HSD3B2P26439 372 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 ITGA1P56199 1179 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 CLDN2P57739 230 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 TUBA3CQ13748 450 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 IL18Q14116 193 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 CST6Q15828 149 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 CPZQ66K79 652 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF776Q68DI1 518 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 ZNF433Q8N7K0 673 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 NDNFQ8TB73 568 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 GAB3Q8WWW8 586 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 PIP5K1AQ99755 562 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 TSSK6Q9BXA6 273 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 SLC2A11Q9BYW1 496 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 OR51I1Q9H343 314 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 C14orf119Q9NWQ9 140 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 GVINP1Q7Z2Y8 2422 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 B4DGG1 531 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 TAF4O00268 1085 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 VNN2O95498 520 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 C1orf105O95561 183 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 GSTM2P28161 218 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 CSNK1DP48730 415 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 METAP1P53582 386 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 IL18R1Q13478 541 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 NDUFAF5Q5TEU4 345 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 TRIM46Q7Z4K8 759 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 LHFPL3Q86UP9 236 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 TRIM73Q86UV7 250 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 DEPDC7Q96QD5 511 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 MGLLQ99685 303 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 IFT27Q9BW83 186 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 IRF2BPLQ9H1B7 796 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 TIGARQ9NQ88 270 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 DMRT3Q9NQL9 472 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 SLC6A13Q9NSD5 602 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 FBXL21Q9UKT6 434 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 RPL36Q9Y3U8 105 aaKnown RBP10.53□□□□□ -0.72
COL27A1-204ENST00000477421 STON1Q9Y6Q2 735 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 ARID1AO14497 2285 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 KIF13BQ9NQT8 1826 aa10.53□□□□□ -0.72
COL27A1-204ENST00000477421 CCDC182A6NF36 153 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 A8MUA0 341 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 HAT1O14929 419 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 HCN1O60741 890 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 B4GALT2O60909 372 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 PCSK2P16519 638 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 UQCRC2P22695 453 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 PFN3P60673 137 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 SELENOWP63302 87 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 TAP2Q03519 686 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 COX10Q12887 443 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 CBX3Q13185 183 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 COX20Q5RI15 118 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 KHDRBS2Q5VWX1 349 aaKnown RBP10.52□□□□□ -0.72
COL27A1-204ENST00000477421 TSPYL5Q86VY4 417 aaPredicted RBP10.52□□□□□ -0.72
COL27A1-204ENST00000477421 METTL27Q8N6F8 245 aaPredicted RBP10.52□□□□□ -0.72
COL27A1-204ENST00000477421 DTX3Q8N9I9 347 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.52□□□□□ -0.72
COL27A1-204ENST00000477421 OR52N2Q8NGI0 321 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 FNDC8Q8TC99 324 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 FCGR1BQ92637 280 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 RIPOR3Q96MK2 946 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 VN1R3Q9BXE9 311 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 SARDHQ9UL12 918 aa10.52□□□□□ -0.72
COL27A1-204ENST00000477421 WBP11Q9Y2W2 641 aaKnown RBP10.52□□□□□ -0.72
COL27A1-204ENST00000477421 CEP350Q5VT06 3117 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 PCDH17O14917 1159 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 B3GALT2O43825 422 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 FADDQ13158 208 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms