RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RAB18Q9NP72 206 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 MRPS30Q9NP92 439 aaKnown RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 PLEK2Q9NYT0 353 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NENFQ9UMX5 172 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NFASCO94856 1347 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 METTL15A6NJ78 407 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 DEDDO75618 318 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 CD97P48960 835 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 MEOX1P50221 254 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 PPP2CBP62714 309 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 MEF2DQ14814 521 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TMEM225Q6GV28 225 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 RHOUQ7L0Q8 258 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 COMMD1Q8N668 190 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 KDF1Q8NAX2 398 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 AQP11Q8NBQ7 271 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 CSPG4P5Q96PW8 444 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TM6SF2Q9BZW4 377 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 LYRM2Q9NU23 88 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 MRPS17Q9Y2R5 130 aaKnown RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 KCNU1A8MYU2 1149 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NPHS1O60500 1241 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SLC22A5O76082 557 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 PRNPP04156 253 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ADH1AP07327 375 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 UQCRFS1P47985 274 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 GTF2A2P52657 109 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 LAMTOR4Q0VGL1 99 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 AVPI1Q5T686 147 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SLC26A9Q7LBE3 791 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 KBTBD6Q86V97 674 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 HORMAD2Q8N7B1 307 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 FAM110BQ8TC76 370 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 FRS2Q8WU20 508 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 GIMAP1Q8WWP7 306 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 LRIG1Q96JA1 1093 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SGCZQ96LD1 299 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 BEX2Q9BXY8 128 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 BEX1Q9HBH7 125 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 CPNE5Q9HCH3 593 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NR2E3Q9Y5X4 410 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TCAPO15273 167 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 CDK14O94921 469 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SCGB1A1P11684 91 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 USF1P22415 310 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 GRIK4Q16099 956 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 PAGE3Q5JUK9 113 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 STEAP3Q658P3 488 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 OR2T27Q8NH04 317 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SGK3Q96BR1 496 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 PRRT1Q99946 306 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SEC22CQ9BRL7 303 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 CACNG6Q9BXT2 260 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 C1orf21Q9H246 121 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ABCB8Q9NUT2 735 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 CHRNA9Q9UGM1 479 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 PNPLA6Q8IY17 1366 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NRCAMQ92823 1304 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 P2RX6O15547 441 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 OLFM2O95897 454 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 APODP05090 189 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NSG1P42857 185 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 MMP14P50281 582 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 DSTNP60981 165 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 NTRK3Q16288 839 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF74Q16587 644 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 DUSP7Q16829 419 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 STEAP4Q687X5 459 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 DHRS11Q6UWP2 260 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 KCTD20Q7Z5Y7 419 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 MCATQ8IVS2 390 aaKnown RBP8.63□□□□□ -1.03
NIPBL-202ENST00000448238 GDPD1Q8N9F7 314 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TAS1R2Q8TE23 839 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 TGIF2Q9GZN2 237 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 SRMSQ9H3Y6 488 aa8.63□□□□□ -1.03
NIPBL-202ENST00000448238 A0A0A6YYJ9 748 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 LOC102723971A0A1B0GUV8 181 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ANKUB1A6NFN9 424 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 TP53I11O14683 189 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ARPC5O15511 151 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 C21orf2O43822 256 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 UGDHO60701 494 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 PTH2RP49190 550 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 NKX3-2P78367 333 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 SLC7A13Q8TCU3 470 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 PREBQ9HCU5 417 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 KCMF1Q9P0J7 381 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 DKKL1Q9UK85 242 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CTTNBP2Q8WZ74 1663 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CHD5Q8TDI0 1954 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 A0A1W2PPL8 197 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 MROH6A6NGR9 719 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CD300LBA8K4G0 201 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 INHAP05111 366 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 BDNFP23560 247 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 GGT2P36268 569 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 SNCAP37840 140 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 HNRNPFP52597 415 aaKnown RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CLCQ05315 142 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms