RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 HDHD2Q9H0R4 259 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 NMNAT1Q9HAN9 279 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ING3Q9NXR8 418 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 VPS29Q9UBQ0 182 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ZNF222Q9UK12 451 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 TRBV4-1A0A0J9YWV2 114 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 GLYATL1P3A0A0U1RQE8 302 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 PCP4L1A6NKN8 68 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CASKO14936 926 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 HPGDSO60760 199 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SCN2BO60939 215 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 ETHE1O95571 254 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 C6orf47O95873 294 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CR2P20023 1033 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CRYBB2P43320 205 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 MAP2K3P46734 347 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC11A2P49281 568 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 GZMKP49863 264 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 RNF144AP50876 292 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CRISP1P54107 249 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 ARF5P84085 180 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SRSF11Q05519 484 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.43□□□□□ -0.91e-5■□□□□ 9.3
PTCHD4-202ENST00000398738 RPS26P11Q5JNZ5 115 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 DDI2Q5TDH0 399 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 LCN1P1Q5VSP4 162 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SERPINA13PQ6UXR4 307 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CASP12Q6UXS9 341 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 DEF8Q6ZN54 512 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 PLEKHH3Q7Z736 793 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC37A3Q8NCC5 494 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 ZFAND1Q8TCF1 268 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 OTULINQ96BN8 352 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 TESCQ96BS2 214 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 P2RY13Q9BPV8 354 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC29A3Q9BZD2 475 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 BEX1Q9HBH7 125 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 RIMKLBQ9ULI2 386 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CLEC4AQ9UMR7 237 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 USP34Q70CQ2 3546 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 TRAV6A0A075B6T7 132 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 TRBC2A0A5B9 178 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 C2orf78A6NCI8 922 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 M0QZQ0 153 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 KDELR3O43731 214 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SEMG1P04279 462 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 ZNF250P15622 560 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 BPIP17213 487 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 GABRB1P18505 474 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CORO1AP31146 461 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CCR7P32248 378 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 AVPR1BP47901 424 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 HBA1P69905 142 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 COL9A2Q14055 689 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SNAPC1Q16533 368 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 MPPE1Q53F39 396 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 GPRC6AQ5T6X5 926 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CDH24Q86UP0 819 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SYNPOQ8N3V7 929 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 DNAJC5GQ8N7S2 189 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 OR52P1PQ8NH57 321 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 KLHL6Q8WZ60 621 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 WBP2Q969T9 261 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 PMEPA1Q969W9 287 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC35A5Q9BS91 424 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 TSSK6Q9BXA6 273 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 TBC1D17Q9HA65 648 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 C3orf14Q9HBI5 128 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 TXNL4BQ9NX01 149 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 A0A075B6Q4 140 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 WASHC1A8K0Z3 465 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 FADS2P1A8MWK0 482 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 J3QW42 95 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SMAD6O43541 496 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 KLKB1P03952 638 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SCG5P05408 212 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SYPP08247 313 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CELA3AP09093 270 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CD33P20138 364 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 PTNP21246 168 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 HMGCLP35914 325 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CTBP2P56545 445 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 SRP54P61011 504 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 NAE1Q13564 534 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 C1DQ13901 141 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 EIF4HQ15056 248 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 ATP13A5Q4VNC0 1218 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 TOR2AQ5JU69 321 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 FAM205BPQ63HN1 556 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 TNFAIP8L2Q6P589 184 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 CNIH2Q6PI25 160 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 OLIG3Q7RTU3 272 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 RBM45Q8IUH3 476 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 DNAJB8Q8NHS0 232 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 OTUB1Q96FW1 271 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 FAM193BQ96PV7 902 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 NELL2Q99435 816 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 RAD9AQ99638 391 aa9.43□□□□□ -0.9
PTCHD4-202ENST00000398738 GON7Q9BXV9 100 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms