RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 DYTNA2CJ06 578 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 HRKO00198 91 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 FOXE1O00358 373 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 CLDN4O14493 209 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 PRKNO60260 465 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 CTNSO60931 367 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 FAM58BPP0C7Q3 252 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 NR2F6P10588 404 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ICAM2P13598 275 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 CPA3P15088 417 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 GNLYP22749 145 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 TPP2P29144 1249 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 SERPINB3P29508 390 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 HMOX2P30519 316 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 PTGER1P34995 402 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 CCT5P48643 541 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 TNFSF10P50591 281 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 NAGLUP54802 743 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 HSD17B7P56937 341 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 PMP22Q01453 160 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 HMGCS1Q01581 520 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 FOLH1Q04609 750 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF844Q08AG5 666 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 GALNT1Q10472 559 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 TBL3Q12788 808 aaKnown RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 STX4Q12846 297 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 LCP2Q13094 533 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 MRPL49Q13405 166 aaKnown RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 CUL3Q13618 768 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF169Q14929 603 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 PCLAFQ15004 111 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 RASA2Q15283 850 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 EXT1Q16394 746 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 KRT71Q3SY84 523 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 CCDC153Q494R4 210 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ACER2Q5QJU3 275 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF468Q5VIY5 522 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ABHD17BQ5VST6 288 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 MRM1Q6IN84 353 aaKnown RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 COMMD6Q7Z4G1 85 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 GPR180Q86V85 440 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 HPS6Q86YV9 775 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 IQCKQ8N0W5 287 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZCCHC7Q8N3Z6 543 aaKnown RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 MREGQ8N565 214 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 BANPQ8N9N5 519 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 APCDD1LQ8NCL9 501 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 OR1N1Q8NGS0 311 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 METTL6Q8TCB7 284 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ELP5Q8TE02 316 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ADAMTS18Q8TE60 1221 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 AGAP11Q8TF27 550 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 SIGLEC12Q96PQ1 595 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 FAM111AQ96PZ2 611 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 LMF1Q96S06 567 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 SERPINI1Q99574 410 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 MECRQ9BV79 373 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ALOXE3Q9BYJ1 711 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ROGDIQ9GZN7 287 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 CDCP1Q9H5V8 836 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 RPF2Q9H7B2 306 aaKnown RBP7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 ASF1BQ9NVP2 202 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 STMN3Q9NZ72 180 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 GRID1Q9ULK0 1009 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 FIS1Q9Y3D6 152 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 PTGDR2Q9Y5Y4 395 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 SPACA6W5XKT8 324 aa7.16□□□□□ -1.26
HMGB3P1-201ENST00000393368 COL6A6A6NMZ7 2263 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 OR5H15A6NDH6 313 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 GABRR3A8MPY1 467 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 C17orf105B2RV13 164 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 TCP11X1B4DZS4 312 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 PGRMC2O15173 223 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 PROM1O43490 865 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 KLHL41O60662 606 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 SEMA3DO95025 777 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 MLYCDO95822 493 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 DDAH2O95865 285 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 TNNI3P19429 210 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 KCNC4Q03721 635 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 BTKQ06187 659 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 TUBA3CQ13748 450 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 RCN2Q14257 317 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 TLR1Q15399 786 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 ELAVL1Q15717 326 aaKnown RBP7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF750Q32MQ0 723 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 CFAP157Q5JU67 520 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 CCNYL2Q5T2Q4 361 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 CLEC6AQ6EIG7 209 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 SPINK14Q6IE38 97 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 H3F3CQ6NXT2 135 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 FAM180BQ6P0A1 224 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 TUBA3EQ6PEY2 450 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZCCHC23Q6ZST2 131 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 FRMD7Q6ZUT3 714 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 METTL4Q8N3J2 472 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 RIBC1Q8N443 379 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLC5A8Q8N695 610 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 C1orf52Q8N6N3 182 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms