RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 LINGO4Q6UY18 593 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 GDPD4Q6W3E5 623 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 DCAF4L2Q8NA75 395 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 GPR174Q9BXC1 333 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 OR51I1Q9H343 314 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.87□□□□□ -1.15
VPS41-202ENST00000310301 A0A1W2PP18 115 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 DENRO43583 198 aaKnown RBP7.87□□□□□ -1.15
VPS41-202ENST00000310301 DNAJB5O75953 348 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 AGXTP21549 392 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 RORAP35398 523 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 FGL2Q14314 439 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 ATAD3CQ5T2N8 411 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 GALNT7Q86SF2 657 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 TCEANCQ8N8B7 351 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 OR7G2Q8NG99 324 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 PRICKLE1Q96MT3 831 aaPredicted RBP7.87□□□□□ -1.15
VPS41-202ENST00000310301 P2RX2Q9UBL9 471 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 PCDHGC4Q9Y5F7 938 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 PTGESO14684 152 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 SFTPBP07988 381 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 GTF2F2P13984 249 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 CEBPBP17676 345 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 NTHL1P78549 312 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 ALG10Q5BKT4 473 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 NUP54Q7Z3B4 507 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 TMEM151AQ8N4L1 468 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 PSD4Q8NDX1 1056 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 SLCO2A1Q92959 643 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 FAM122AQ96E09 287 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 HIST1H2AAQ96QV6 131 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 FUNDC2Q9BWH2 189 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 DTLQ9NZJ0 730 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 CDH10Q9Y6N8 788 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 MAST2Q6P0Q8 1798 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 C2CD4BA6NLJ0 364 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 HIDE1A8MVS5 230 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 B8ZZF3 427 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 E7EQ34 232 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 FLRT2O43155 660 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 TSPAN6O43657 245 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 DFNA5O60443 496 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 RAB3BP20337 219 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 CHRNA4P43681 627 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 PLA2G16P53816 162 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 HNRNPKP61978 463 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS41-202ENST00000310301 ERVK-25P63136 954 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 INCA1Q0VD86 236 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 FAPQ12884 760 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 KCNAB2Q13303 367 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 PCLAFQ15004 111 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 SPATS1Q496A3 300 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 CRTC1Q6UUV9 634 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 FAM198BQ6UWH4 519 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 OSTM1Q86WC4 334 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 LNX2Q8N448 690 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 OR10T2Q8NGX3 314 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 ZCCHC10Q8TBK6 192 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 GPR151Q8TDV0 419 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 TCEAL3Q969E4 200 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 NTAN1Q96AB6 310 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 TRMT2BQ96GJ1 504 aaKnown RBP7.87□□□□□ -1.15
VPS41-202ENST00000310301 CACNG4Q9UBN1 327 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 IFT52Q9Y366 437 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 NFS1Q9Y697 457 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 SSC5DA1L4H1 1573 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 TAF1LQ8IZX4 1826 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 YJEFN3A6XGL0 299 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 PCDH17O14917 1159 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 INSIG1O15503 277 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 COCHO43405 550 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 UBXN7O94888 489 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 ASGR2P07307 311 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 GKN3PP0CG01 181 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 C5AR1P21730 350 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 CMPK1P30085 196 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 PPP5CP53041 499 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 RPS21P63220 83 aaKnown RBP7.87□□□□□ -1.15
VPS41-202ENST00000310301 ELAVL3Q14576 367 aaKnown RBP7.87□□□□□ -1.15
VPS41-202ENST00000310301 TAF1AQ15573 450 aaPredicted RBP7.87□□□□□ -1.15
VPS41-202ENST00000310301 PNCKQ6P2M8 343 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 HSDL2Q6YN16 418 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 TREML1Q86YW5 311 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 DCP2Q8IU60 420 aaKnown RBP7.87□□□□□ -1.15
VPS41-202ENST00000310301 NEIL3Q8TAT5 605 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 LMLNQ96KR4 655 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 RDH12Q96NR8 316 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 OR5B12Q96R08 314 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 CCDC32Q9BV29 185 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 FOLH1BQ9HBA9 442 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 CENPMQ9NSP4 180 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 RHCGQ9UBD6 479 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 KRBA1A5PL33 1030 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 OR51F1A6NGY5 319 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 F8W036 122 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 GABRDO14764 452 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 PTTG1O95997 202 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 CTGFP29279 349 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 CLCN7P51798 805 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 TAS2R43P59537 309 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms