RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 SOX17Q9H6I2 414 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 TBC1D23Q9NUY8 699 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 A0A1W2PP18 115 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 OR5K3A6NET4 321 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 G3V2T6 193 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 GFRA3O60609 400 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 OPN1SWP03999 348 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 TSPAN19P0C672 248 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 GLB1P16278 677 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 ADARP55265 1226 aaKnown RBP8.82□□□□□ -1
PTPRE-202ENST00000306042 POLE2P56282 527 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 ERVPABLB-1P60509 514 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 CDKL1Q00532 357 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 SRSF5Q13243 272 aaKnown RBP8.82□□□□□ -1
PTPRE-202ENST00000306042 TOP3AQ13472 1001 aaPredicted RBP8.82□□□□□ -1
PTPRE-202ENST00000306042 CYP27C1Q4G0S4 372 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 CDHR3Q6ZTQ4 885 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 LARP4Q71RC2 724 aaKnown RBP eCLIP8.82□□□□□ -1
PTPRE-202ENST00000306042 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.82□□□□□ -1
PTPRE-202ENST00000306042 TEX19Q8NA77 164 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 RCBTB1Q8NDN9 531 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 OR9I1Q8NGQ6 314 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 OR56A3Q8NH54 315 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 TBC1D20Q96BZ9 403 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 L3HYPDHQ96EM0 354 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 LOXL4Q96JB6 756 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 SPATA9Q9BWV2 254 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 LRRN3Q9H3W5 708 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 B3GAT2Q9NPZ5 323 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 TIGARQ9NQ88 270 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 FAM86C1Q9NVL1 165 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 PCDHGA5Q9Y5G8 931 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 LMO7DNF2Z398 122 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 M0QX08 132 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 TYROBPO43914 113 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 PSMG1O95456 288 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 MMP2P08253 660 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 CORO7P57737 925 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 HSDL2Q6YN16 418 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 OR2L3Q8NG85 312 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 OR4C6Q8NH72 309 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 MOSPD2Q8NHP6 518 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 AGAP11Q8TF27 550 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 FER1L6-AS2Q96M78 137 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 DMRT3Q9NQL9 472 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 KLHL1Q9NR64 748 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 CCNB2O95067 398 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 MFN2O95140 757 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 NR2C1P13056 603 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 AOC1P19801 751 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 COL9A1P20849 921 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 PSMB9P28065 219 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 HOXD12P35452 270 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 BNIP3Q12983 259 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 GRIK2Q13002 908 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 SNAPC1Q16533 368 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 IKBIPQ70UQ0 350 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 PACS2Q86VP3 889 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 HIPK1Q86Z02 1210 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 ZDHHC21Q8IVQ6 265 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 NETO1Q8TDF5 533 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 C16orf78Q8WTQ4 265 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 PATE1Q8WXA2 126 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 TRIM4Q9C037 500 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 BRF2Q9HAW0 419 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 EURLQ9NYK6 297 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 LIPT1Q9Y234 373 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 PLXNA1Q9UIW2 1896 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 SIPA1L1O43166 1804 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 C2orf92A0A1B0GVN3 265 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 K7EQS6 105 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 AK1P00568 194 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 RAB15P59190 212 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 RPS3AP61247 264 aaKnown RBP8.82□□□□□ -1
PTPRE-202ENST00000306042 EEF1A2Q05639 463 aaKnown RBP8.82□□□□□ -1
PTPRE-202ENST00000306042 SLC30A6Q6NXT4 461 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 PTCHD4Q6ZW05 846 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 ZNF550Q7Z398 422 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 DEFB124Q8NES8 71 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 LKAAEAR1Q8TD35 194 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 FRS2Q8WU20 508 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 PNPLA2Q96AD5 504 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 ZNF347Q96SE7 839 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 ASPNQ9BXN1 380 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 RACGAP1Q9H0H5 632 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 TRPV5Q9NQA5 729 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 DHCR7Q9UBM7 475 aaKnown RBP8.82□□□□□ -1
PTPRE-202ENST00000306042 IKZF2Q9UKS7 526 aa8.82□□□□□ -1
PTPRE-202ENST00000306042 RFPL3O75679 317 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 ZNF823P16415 610 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 CTSKP43235 329 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 CLCN2P51788 898 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 NR0B1P51843 470 aaKnown RBP8.81□□□□□ -1
PTPRE-202ENST00000306042 CTBP2P56545 445 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 TAS2R38P59533 333 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 ZP2Q05996 745 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 EIF3IQ13347 325 aaKnown RBP8.81□□□□□ -1
PTPRE-202ENST00000306042 REEP3Q6NUK4 255 aa8.81□□□□□ -1
PTPRE-202ENST00000306042 CYP4V2Q6ZWL3 525 aaPredicted RBP8.81□□□□□ -1
PTPRE-202ENST00000306042 BHLHA9Q7RTU4 235 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms