RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 RPS3P23396 243 aaKnown RBP eCLIP12.81□□□□□ -0.36
SCAF4-201ENST00000286835 CD70P32970 193 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 SDC2P34741 201 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 CBSP35520 551 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 HTR3AP46098 478 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 CSTF1Q05048 431 aaKnown RBP12.81□□□□□ -0.36
SCAF4-201ENST00000286835 GPAT3Q53EU6 434 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 FBXO46Q6PJ61 603 aaPredicted RBP12.81□□□□□ -0.36
SCAF4-201ENST00000286835 ATP6V1C2Q8NEY4 427 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 SEC14L4Q9UDX3 406 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 PLAGL1Q9UM63 463 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 CFAP20Q9Y6A4 193 aaKnown RBP12.81□□□□□ -0.36
SCAF4-201ENST00000286835 PRAMEF33A0A0G2JMD5 474 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 A0A1B0GVC2 190 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 A6NIN4 97 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 C12orf71A8MTZ7 269 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 ISM1B1AKI9 464 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 H7C0S8 307 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 PRAMEF10O60809 474 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 H1F0P07305 194 aaKnown RBP12.81□□□□□ -0.36
SCAF4-201ENST00000286835 TIA1P31483 386 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■□□ 18.1
SCAF4-201ENST00000286835 ZNF763Q0D2J5 394 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 COX10Q12887 443 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 LMAN2Q12907 356 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 FXNQ16595 210 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 BAK1Q16611 211 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 TMIGD1Q6UXZ0 262 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 NOXA1Q86UR1 476 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 OXR1Q8N573 874 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 TM9SF2Q99805 663 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 CCDC32Q9BV29 185 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 MND1Q9BWT6 205 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 HDHD5Q9BXW7 423 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 REEP4Q9H6H4 257 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 ZC4H2Q9NQZ6 224 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 CCDC59Q9P031 241 aaKnown RBP12.81□□□□□ -0.36
SCAF4-201ENST00000286835 GPSM3Q9Y4H4 160 aa12.81□□□□□ -0.36
SCAF4-201ENST00000286835 SNTNA6NMZ2 147 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 SLC9A3R1O14745 358 aaPredicted RBP12.8□□□□□ -0.36
SCAF4-201ENST00000286835 INPPL1O15357 1258 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 TPGS2Q68CL5 300 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 LINC00299Q6ZSB3 139 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 RD3Q7Z3Z2 195 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 POF1BQ8WVV4 589 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 JPH3Q8WXH2 748 aaPredicted RBP12.8□□□□□ -0.36
SCAF4-201ENST00000286835 AP3S1Q92572 193 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 TMEM175Q9BSA9 504 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 ZNF226Q9NYT6 803 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 SPATA2Q9UM82 520 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 NAALAD2Q9Y3Q0 740 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 CCDC88CQ9P219 2028 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 TRIM64BA6NI03 449 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 NOS1APO75052 506 aaPredicted RBP12.8□□□□□ -0.36
SCAF4-201ENST00000286835 IL3P08700 152 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 PTX3P26022 381 aaPredicted RBP12.8□□□□□ -0.36
SCAF4-201ENST00000286835 BMPR1AP36894 532 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 MAGEA2P43356 314 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 MAPK12P53778 367 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 PIN1Q13526 163 aaPredicted RBP12.8□□□□□ -0.36
SCAF4-201ENST00000286835 LUZP2Q86TE4 346 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 HOMEZQ8IX15 550 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 LRR1Q96L50 414 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 ATG13O75143 517 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 CST5P28325 142 aaPredicted RBP12.8□□□□□ -0.36
SCAF4-201ENST00000286835 GINS1Q14691 196 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 OR2G6Q5TZ20 316 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 OLIG3Q7RTU3 272 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 COMMD6Q7Z4G1 85 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 CDH24Q86UP0 819 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 Q8N402 240 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 IL17RDQ8NFM7 739 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 ASB15Q8WXK1 588 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 SNAPC3Q92966 411 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 AP2M1Q96CW1 435 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 TEFMQ96QE5 360 aaKnown RBP12.8□□□□□ -0.36
SCAF4-201ENST00000286835 BBS4Q96RK4 519 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 MTG2Q9H4K7 406 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 BEX1Q9HBH7 125 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 IL20RAQ9UHF4 553 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 INSL5Q9Y5Q6 135 aa12.8□□□□□ -0.36
SCAF4-201ENST00000286835 TEX28O15482 410 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 CCT3P49368 545 aaKnown RBP12.79□□□□□ -0.36
SCAF4-201ENST00000286835 RAB8AP61006 207 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 SPIN4Q56A73 249 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 TEX47Q8TBZ9 253 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 ASB11Q8WXH4 323 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 IL17FQ96PD4 163 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 NELL2Q99435 816 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 SPRTNQ9H040 489 aaPredicted RBP12.79□□□□□ -0.36
SCAF4-201ENST00000286835 SERHL2Q9H4I8 314 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 RDH14Q9HBH5 336 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 TRBV4-1A0A0J9YWV2 114 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 ARHGEF33A8MVX0 844 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 HOXC11O43248 304 aaPredicted RBP12.79□□□□□ -0.36
SCAF4-201ENST00000286835 ETHE1O95571 254 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 PTPN2P17706 415 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 CELP19835 753 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 PCGF2P35227 344 aa12.79□□□□□ -0.36
SCAF4-201ENST00000286835 MRPL19P49406 292 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms