RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 PPM1DO15297 605 aa7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 CELA2BP08218 269 aaPredicted RBP7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 LAMP1P11279 417 aa7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 HSPA13P48723 471 aa7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 TRIM25Q14258 630 aaKnown RBP7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 SF3A2Q15428 464 aaKnown RBP7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 GPR68Q15743 365 aa7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 OTUD3Q5T2D3 398 aaPredicted RBP7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 LARP4Q71RC2 724 aaKnown RBP eCLIP7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 TRIM46Q7Z4K8 759 aa7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 JSRP1Q96MG2 331 aaPredicted RBP7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 COL21A1Q96P44 957 aa7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 ARHGAP9Q9BRR9 750 aa7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 SDHAF3Q9NRP4 125 aa7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 SEMA4GQ9NTN9 838 aa7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 NXT1Q9UKK6 140 aaKnown RBP7.86□□□□□ -1.15
GTF3C3-201ENST00000263956 DOCK6Q96HP0 2047 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 TNFSF14O43557 240 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 GPR37L1O60883 481 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SCN2BO60939 215 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SOD1P00441 154 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 RORAP35398 523 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 TSFMP43897 325 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 FASLGP48023 281 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 RAB38P57729 211 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 RAB15P59190 212 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 POU6F2P78424 691 aaPredicted RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 FBXW10Q5XX13 1052 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 RANBP3LQ86VV4 465 aaPredicted RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SPPL2CQ8IUH8 684 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 ARMC8Q8IUR7 673 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 P3H2Q8IVL5 708 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SPNS2Q8IVW8 549 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 RCBTB1Q8NDN9 531 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 ABHD11Q8NFV4 315 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 TMEM125Q96AQ2 219 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SLC47A1Q96FL8 570 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 C3orf30Q96M34 536 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 TEFMQ96QE5 360 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 C9orf16Q9BUW7 83 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 CLK4Q9HAZ1 481 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 DHCR7Q9UBM7 475 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 PILRBQ9UKJ0 227 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 NCOR1O75376 2440 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 CABIN1Q9Y6J0 2220 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 IGHV1OR21-1A0A087WYE8 117 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SCDO00767 359 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 TP53I11O14683 189 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 LSM1O15116 133 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 GPR75O95800 540 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 TFPIP10646 304 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 VHLP40337 213 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 CENPAP49450 140 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 ESRRGP62508 458 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 BNC1Q01954 994 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 TRA2AQ13595 282 aaKnown RBP eCLIP7.85□□□□□ -1.156e-7■■■■□ 25.8
GTF3C3-201ENST00000263956 NR1D2Q14995 579 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 LRRC69Q6ZNQ3 347 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SH2D5Q6ZV89 423 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 ZNF551Q7Z340 670 aaPredicted RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 RNF130Q86XS8 419 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 ZNF595Q8IYB9 648 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 ZNF248Q8NDW4 579 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 OR51Q1Q8NH59 317 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.85□□□□□ -1.156e-7■■■■■ 42.6
GTF3C3-201ENST00000263956 PYDC1Q8WXC3 89 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 TRAPPC9Q96Q05 1148 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 CTRCQ99895 268 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 C3orf18Q9UK00 162 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 WDR45Q9Y484 360 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 ZNF749O43361 778 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 CST1P01037 141 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 C1QAP02745 245 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 BCHEP06276 602 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SPIBQ01892 262 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 FADDQ13158 208 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 IFI44LQ53G44 452 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 ABHD17CQ6PCB6 329 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 TMEM107Q6UX40 140 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 C6orf120Q7Z4R8 191 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 CADM2Q8N3J6 435 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 DEFB124Q8NES8 71 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 KLHL6Q8WZ60 621 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 CLPTM1LQ96KA5 538 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 CCDC74BQ96LY2 380 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SLC39A3Q9BRY0 314 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 CCDC90BQ9GZT6 254 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 MKKSQ9NPJ1 570 aaPredicted RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 MBD1Q9UIS9 605 aaPredicted RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 PCOLCE2Q9UKZ9 415 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 SAMHD1Q9Y3Z3 626 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 KNTC1P50748 2209 aa7.85□□□□□ -1.15
GTF3C3-201ENST00000263956 A0A1B0GX78 115 aa7.84□□□□□ -1.15
GTF3C3-201ENST00000263956 SNTNA6NMZ2 147 aa7.84□□□□□ -1.15
GTF3C3-201ENST00000263956 UBFD1O14562 309 aaKnown RBP7.84□□□□□ -1.15
GTF3C3-201ENST00000263956 IGHEP01854 428 aa7.84□□□□□ -1.15
GTF3C3-201ENST00000263956 CD247P20963 164 aa7.84□□□□□ -1.15
GTF3C3-201ENST00000263956 NOS3P29474 1203 aa7.84□□□□□ -1.15
GTF3C3-201ENST00000263956 GABRA3P34903 492 aa7.84□□□□□ -1.15
GTF3C3-201ENST00000263956 CA5AP35218 305 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms