RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 RPS25P62851 125 aaKnown RBP13.59□□□□□ -0.23
SHPK-201ENST00000225519 CSTF1Q05048 431 aaKnown RBP13.59□□□□□ -0.23
SHPK-201ENST00000225519 FCN2Q15485 313 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 DEF8Q6ZN54 512 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 KIAA1143Q96AT1 154 aaPredicted RBP13.59□□□□□ -0.23
SHPK-201ENST00000225519 MSLNLQ96KJ4 702 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 C12orf10Q9HB07 376 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 IL26Q9NPH9 171 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 FTSJ1Q9UET6 329 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 SLC43A1O75387 559 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 C6orf47O95873 294 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 DHFRP00374 187 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 ACRV1P26436 265 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 CPT1AP50416 773 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 CLDN20P56880 219 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 DCST1Q5T197 706 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 BCL2L15Q5TBC7 163 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 OR2G6Q5TZ20 316 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 METTL2BQ6P1Q9 378 aaKnown RBP13.59□□□□□ -0.23
SHPK-201ENST00000225519 ZNF680Q8NEM1 530 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 GATAD2BQ8WXI9 593 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 AP2M1Q96CW1 435 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 EID2BQ96D98 161 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 HTATIP2Q9BUP3 242 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 KATNB1Q9BVA0 655 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 TBC1D17Q9HA65 648 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 ADAM30Q9UKF2 790 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 CCDC88CQ9P219 2028 aa13.59□□□□□ -0.23
SHPK-201ENST00000225519 E9PQ18 207 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 LRRTM2O43300 516 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 IGHA2P01877 340 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 GBAP04062 536 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 ZNF30P17039 623 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 LHCGRP22888 699 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 ITGB7P26010 798 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 TRIM71Q2Q1W2 868 aaKnown RBP13.58□□□□□ -0.23
SHPK-201ENST00000225519 SPDYE7PQ495Y7 208 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 KRT74Q7RTS7 529 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 OR8J1Q8NGP2 316 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 ADAM2Q99965 735 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 SGK2Q9HBY8 427 aa13.58□□□□□ -0.23
SHPK-201ENST00000225519 GBF1Q92538 1859 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 GCM2O75603 506 aaPredicted RBP13.58□□□□□ -0.24
SHPK-201ENST00000225519 OSMP13725 252 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 DDCP20711 480 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 MZT2AQ6P582 158 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 KIF18BQ86Y91 864 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 UFD1Q92890 307 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 PCDHB8Q9UN66 801 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 LSM2Q9Y333 95 aaKnown RBP13.58□□□□□ -0.24
SHPK-201ENST00000225519 PDE4DIPQ5VU43 2346 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 TRBV4-1A0A0J9YWV2 114 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 NCR1O76036 304 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 MSL3P1P0C860 447 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 RHCEP18577 417 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 AOAHP28039 575 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 RGS1Q08116 209 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 PCDH1Q08174 1060 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 SF3A2Q15428 464 aaKnown RBP13.58□□□□□ -0.24
SHPK-201ENST00000225519 HS6ST3Q8IZP7 471 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 SLC28A3Q9HAS3 691 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 BTNL2Q9UIR0 455 aa13.58□□□□□ -0.24
SHPK-201ENST00000225519 C2orf78A6NCI8 922 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 RAB36O95755 333 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 JUPP14923 745 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 ZNF81P51508 661 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 KLHL22Q53GT1 634 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 ZNF730Q6ZMV8 503 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 ZNF467Q7Z7K2 595 aaPredicted RBP13.57□□□□□ -0.24
SHPK-201ENST00000225519 C9orf62Q8N4C0 152 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 FAM181AQ8N9Y4 354 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 PCDHGB7Q9Y5F8 929 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 TNS1Q9HBL0 1735 aaKnown RBP13.57□□□□□ -0.24
SHPK-201ENST00000225519 XCR1P46094 333 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 CTBP2P56545 445 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 PER3P56645 1201 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 ABATP80404 500 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 RBBP4Q09028 425 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 NCEH1Q6PIU2 408 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 ANKS3Q6ZW76 656 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 AIFM2Q9BRQ8 373 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 TMED9Q9BVK6 235 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 TMEM121BQ9BXQ6 578 aaPredicted RBP13.57□□□□□ -0.24
SHPK-201ENST00000225519 THSD1Q9NS62 852 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 HCN2Q9UL51 889 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 PCDHB7Q9Y5E2 793 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 PIPSLA2A3N6 862 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 LGI1O95970 557 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 HBA1P69905 142 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 BCL2L1Q07817 233 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 GGTA1PQ4G0N0 100 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 LYPLAL1Q5VWZ2 237 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 CD300LGQ6UXG3 332 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 USP50Q70EL3 339 aaPredicted RBP13.57□□□□□ -0.24
SHPK-201ENST00000225519 MARCH9Q86YJ5 346 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 NXPE1Q8N323 547 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 L3MBTL4Q8NA19 623 aa13.57□□□□□ -0.24
SHPK-201ENST00000225519 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms