RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 FOXE1O00358 373 aaPredicted RBP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 TMPRSS11DO60235 418 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 LDB3O75112 727 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 VPS4BO75351 444 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 PRKRAO75569 313 aaKnown RBP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 GSTA1P08263 222 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 CPN2P22792 545 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 ATP5F1P24539 256 aaPredicted RBP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 PTX3P26022 381 aaPredicted RBP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 BSGP35613 385 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 TSFMP43897 325 aaKnown RBP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 HNRNPH2P55795 449 aaKnown RBP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 HERVK_113P63132 956 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 ZNF678Q5SXM1 525 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 TTC19Q6DKK2 380 aaPredicted RBP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 LCA5Q86VQ0 697 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 ATCAYQ86WG3 371 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 GALNT11Q8NCW6 608 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 ERVK-6Q9BXR3 956 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 VPS4AQ9UN37 437 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 ATG4BQ9Y4P1 393 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 COPG1Q9Y678 874 aaKnown RBP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 DOPEY2Q9Y3R5 2298 aa18.08■□□□□ 0.48
TMEM249-202ENST00000562477 USP9XQ93008 2570 aaPredicted RBP18.08■□□□□ 0.48
TMEM249-202ENST00000562477 TCP11X1B4DZS4 312 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 CTNSO60931 367 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 SUPT7LO94864 414 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 OR4F21O95013 312 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 OTCP00480 354 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 GBAP04062 536 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 KRT15P19012 456 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 PRKAA2P54646 552 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 CLCQ05315 142 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 MRPL49Q13405 166 aaKnown RBP18.07■□□□□ 0.48
TMEM249-202ENST00000562477 RCN2Q14257 317 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 GGTA1PQ4G0N0 100 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 TCHHL1Q5QJ38 904 aaPredicted RBP18.07■□□□□ 0.48
TMEM249-202ENST00000562477 C18orf63Q68DL7 685 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 OR4N5Q8IXE1 308 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 APCDD1LQ8NCL9 501 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 AENQ8WTP8 325 aaKnown RBP18.07■□□□□ 0.48
TMEM249-202ENST00000562477 SREK1Q8WXA9 508 aaKnown RBP18.07■□□□□ 0.48
TMEM249-202ENST00000562477 ANKRD9Q96BM1 317 aaPredicted RBP18.07■□□□□ 0.48
TMEM249-202ENST00000562477 ZNF354BQ96LW1 612 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 CENPKQ9BS16 269 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 ALOXE3Q9BYJ1 711 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 RNF32Q9H0A6 362 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 CDCP1Q9H5V8 836 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 ANKRD10Q9NXR5 420 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 TEKT2Q9UIF3 430 aa18.07■□□□□ 0.48
TMEM249-202ENST00000562477 ZNF223Q9UK11 482 aaPredicted RBP18.07■□□□□ 0.48
TMEM249-202ENST00000562477 POLEQ07864 2286 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 HIVEP3Q5T1R4 2406 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 A0A0A6YYD5 115 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 TRAV17A0A0B4J275 112 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 TRBV11-1A0A0K0K1C0 115 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 TLDC2A0PJX2 215 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 OR5H15A6NDH6 313 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 WASHC1A8K0Z3 465 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 PROCP04070 461 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 IFNA16P05015 189 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 TAS2R50P59544 299 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 SRSF1Q07955 248 aaKnown RBP eCLIP18.06■□□□□ 0.48
TMEM249-202ENST00000562477 IFT88Q13099 833 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 CUL3Q13618 768 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 NR6A1Q15406 480 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 MEP1AQ16819 746 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 C4orf33Q8N1A6 199 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 ZCCHC7Q8N3Z6 543 aaKnown RBP18.06■□□□□ 0.48
TMEM249-202ENST00000562477 SLC5A8Q8N695 610 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 GRHL3Q8TE85 626 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 UCN3Q969E3 161 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 NCLNQ969V3 563 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 HBEGFQ99075 208 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 DDX31Q9H8H2 851 aaKnown RBP18.06■□□□□ 0.48
TMEM249-202ENST00000562477 ADAP2Q9NPF8 381 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 DCDC2Q9UHG0 476 aa18.06■□□□□ 0.48
TMEM249-202ENST00000562477 PTPN13Q12923 2485 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 GABRR3A8MPY1 467 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 G3V2L1 256 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 FGF17O60258 216 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 PRKNO60260 465 aaPredicted RBP18.05■□□□□ 0.48
TMEM249-202ENST00000562477 GLRA3O75311 464 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 PDYNP01213 254 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 IMPDH1P20839 514 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 SRSF11Q05519 484 aaKnown RBP18.05■□□□□ 0.48
TMEM249-202ENST00000562477 STX4Q12846 297 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 TUBA3CQ13748 450 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 RASA2Q15283 850 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 ERCC6LQ2NKX8 1250 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 ZNF468Q5VIY5 522 aaPredicted RBP18.05■□□□□ 0.48
TMEM249-202ENST00000562477 MRM1Q6IN84 353 aaKnown RBP18.05■□□□□ 0.48
TMEM249-202ENST00000562477 TUBA3EQ6PEY2 450 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 GPR180Q86V85 440 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 RPS19BP1Q86WX3 136 aaKnown RBP18.05■□□□□ 0.48
TMEM249-202ENST00000562477 CDYL2Q8N8U2 506 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 B3GNT7Q8NFL0 401 aa18.05■□□□□ 0.48
TMEM249-202ENST00000562477 THAP3Q8WTV1 239 aaPredicted RBP18.05■□□□□ 0.48
TMEM249-202ENST00000562477 SIGLEC12Q96PQ1 595 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms