RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 FAM86C1Q9NVL1 165 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TMEM248Q9NWD8 314 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 NDUFAF4Q9P032 175 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 EIF3KQ9UBQ5 218 aaKnown RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 RIMKLBQ9ULI2 386 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 Q9Y3F1 56 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SPIN1Q9Y657 262 aaPredicted RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 A0A0D9SEW6 157 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 IQCMA0A1B0GVH7 501 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 CASKO14936 926 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 STK16O75716 305 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SLC25A14O95258 325 aaPredicted RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 EBLN1P0CF75 366 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 HLA-EP13747 358 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF30P17039 623 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 PTPN6P29350 595 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SSTR2P30874 369 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 CD52P31358 61 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 PTGER3P43115 390 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 CRYBB2P43320 205 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 CLCN7P51798 805 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 PER3P56645 1201 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 HSPA14Q0VDF9 509 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SERINC3Q13530 473 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 NCF4Q15080 339 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SF1Q15637 639 aaKnown RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 CRTC2Q53ET0 693 aaPredicted RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 IFI44LQ53G44 452 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TOR1AIP1Q5JTV8 583 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 UBXN11Q5T124 520 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 CNIH2Q6PI25 160 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 FAM151BQ6UXP7 276 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TMIGD1Q6UXZ0 262 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ASB18Q6ZVZ8 466 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ANKS3Q6ZW76 656 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TRIM46Q7Z4K8 759 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 BCDIN3DQ7Z5W3 292 aaKnown RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SCD5Q86SK9 330 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 PDZD3Q86UT5 571 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 FAM9CQ8IZT9 166 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SDR16C5Q8N3Y7 309 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TEX26Q8N6G2 289 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF680Q8NEM1 530 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 OR7D4Q8NG98 312 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 GPR152Q8TDT2 470 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 BTN2A2Q8WVV5 523 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 KLHL6Q8WZ60 621 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 AP3S1Q92572 193 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SLC25A46Q96AG3 418 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ZBED6CLQ96FA7 236 aaPredicted RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TMEM80Q96HE8 168 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 C1orf74Q96LT6 269 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 NELL2Q99435 816 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 GPR63Q9BZJ6 419 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 KATNBL1Q9H079 304 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 CSNK1G1Q9HCP0 422 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 RBFOX1Q9NWB1 397 aaKnown RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TXNL4BQ9NX01 149 aaKnown RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ARL15Q9NXU5 204 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TRPS1Q9UHF7 1281 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 DHRS7Q9Y394 339 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SPTBN4Q9H254 2564 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TRAV6A0A075B6T7 132 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 HYKKA2RU49 373 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 OR5K3A6NET4 321 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 PRR23AA6NEV1 266 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 FAM227AF5H4B4 570 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TLR4O00206 839 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 PROM1O43490 865 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 HPGDSO60760 199 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 EFCAB14O75071 495 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TRIM3O75382 744 aaPredicted RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 APOL3O95236 402 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 GADD45GO95257 159 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 POMCP01189 267 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 EPOP01588 193 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SEMG1P04279 462 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TP53P04637 393 aaPredicted RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 SRCP12931 536 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ACPPP15309 386 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 NAGAP17050 411 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ENPP1P22413 925 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 GSTM5P46439 218 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 RGRP47804 291 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 LIMK1P53667 647 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 PTPN5P54829 565 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 MGAT3Q09327 533 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 LRRC74AQ0VAA2 488 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 BTN1A1Q13410 526 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 LRRC32Q14392 662 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ZMYND11Q15326 602 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 P2RY14Q15391 338 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 LEXMQ3ZCV2 418 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 GARNL3Q5VVW2 1013 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TMEM65Q6PI78 240 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 TEX261Q6UWH6 196 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 CASP12Q6UXS9 341 aa4.85□□□□□ -1.63
HMG20A-204ENST00000558288 ZNF598Q86UK7 904 aaKnown RBP4.85□□□□□ -1.63
HMG20A-204ENST00000558288 LRRTM3Q86VH5 581 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms