RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ALPPL2P10696 532 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 MAGP20916 626 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 CASP3P42574 277 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 SOX9P48436 509 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 ITGA1P56199 1179 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 SPIBQ01892 262 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 SCARB2Q14108 478 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 MAD2L1BPQ15013 274 aaPredicted RBP14.1□□□□□ -0.15
DDX55-209ENST00000542286 EXOC3L2Q2M3D2 409 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 SZRD1Q7Z422 152 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 ENTHD1Q8IYW4 607 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 C11orf65Q8NCR3 313 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 CHFRQ96EP1 664 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 WFDC6Q9BQY6 131 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 SGPP1Q9BX95 441 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 SLC6A17Q9H1V8 727 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 MBNL1Q9NR56 388 aaKnown RBP14.1□□□□□ -0.15
DDX55-209ENST00000542286 RAD18Q9NS91 495 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 TAS2R16Q9NYV7 291 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 TAAR2Q9P1P5 351 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 AP3M1Q9Y2T2 418 aa14.1□□□□□ -0.15
DDX55-209ENST00000542286 SERTM1A2A2V5 107 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 TNFRSF11BO00300 401 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 TBX1O43435 398 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 PRMT3O60678 531 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 SRPRAP08240 638 aaKnown RBP14.09□□□□□ -0.15
DDX55-209ENST00000542286 ITGAMP11215 1152 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 CHRNB1P11230 501 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 SPNP16150 400 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 ITGB7P26010 798 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 ACADLP28330 430 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 ASMTP46597 345 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 SLC35A2P78381 396 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 EPS8Q12929 822 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 TOP3AQ13472 1001 aaPredicted RBP14.09□□□□□ -0.15
DDX55-209ENST00000542286 SOWAHCQ53LP3 525 aaPredicted RBP14.09□□□□□ -0.15
DDX55-209ENST00000542286 PRAMEF14Q5SWL7 426 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 PRAMEF13Q5VWM6 474 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 RSBN1Q5VWQ0 802 aaPredicted RBP14.09□□□□□ -0.15
DDX55-209ENST00000542286 P2RY8Q86VZ1 359 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.09□□□□□ -0.15
DDX55-209ENST00000542286 FGF13Q92913 245 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 TP53INP1Q96A56 240 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 BCL7BQ9BQE9 202 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 DOHHQ9BU89 302 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 OSGEPL1Q9H4B0 414 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 CXorf36Q9H7Y0 433 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 BTNL2Q9UIR0 455 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 NDRG4Q9ULP0 352 aaKnown RBP14.09□□□□□ -0.15
DDX55-209ENST00000542286 NAALAD2Q9Y3Q0 740 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 LYVE1Q9Y5Y7 322 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 ISPDA4D126 451 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 GLOD5A6NK44 160 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 CENPBD1B2RD01 187 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 ZNF197O14709 1029 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 IDH3BO43837 385 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 TNFRSF21O75509 655 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 PCDH8O95206 1070 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 CA3P07451 260 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 RYKP34925 604 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 HSPB3Q12988 150 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 DUSP7Q16829 419 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 KIAA1614Q5VZ46 1190 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 STEAP3Q658P3 488 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 TMIGD1Q6UXZ0 262 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 CCDC103Q8IW40 242 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 UTP15Q8TED0 518 aaKnown RBP14.09□□□□□ -0.15
DDX55-209ENST00000542286 TFGQ92734 400 aaPredicted RBP14.09□□□□□ -0.15
DDX55-209ENST00000542286 SLIRPQ9GZT3 109 aaKnown RBP14.09□□□□□ -0.15
DDX55-209ENST00000542286 MIR1-1HGQ9H1L0 117 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 OR52A5Q9H2C5 316 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 IGFLR1Q9H665 355 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 PCDHGA6Q9Y5G7 932 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 SCN3AQ9NY46 2000 aa14.09□□□□□ -0.15
DDX55-209ENST00000542286 PLPP1O14494 284 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 C9P02748 559 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 IGFBP1P08833 259 aaPredicted RBP14.08□□□□□ -0.16
DDX55-209ENST00000542286 IL1RNP18510 177 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 GRK3P35626 688 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 CRISP3P54108 245 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 DESI1Q6ICB0 168 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 TANGO2Q6ICL3 276 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 ERICH5Q6P6B1 374 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.08□□□□□ -0.16
DDX55-209ENST00000542286 MSANTD1Q6ZTZ1 278 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 ADCK2Q7Z695 626 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 FAM83CQ9BQN1 747 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 EPS8L2Q9H6S3 715 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 MIEF1Q9NQG6 463 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 DYRK4Q9NR20 520 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 ADPRHL2Q9NX46 363 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 RNF6Q9Y252 685 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 KLHL20Q9Y2M5 609 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 SCN2AQ99250 2005 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 A0A1W2PRB8 838 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 QSOX1O00391 747 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 MID1O15344 667 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 HOXC11O43248 304 aaPredicted RBP14.08□□□□□ -0.16
DDX55-209ENST00000542286 CCNKO75909 580 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 SELENOWP63302 87 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms