RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 CDC14CA4D256 554 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 H3BSA7 217 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 SLC22A2O15244 555 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 PRKNO60260 465 aaPredicted RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 RDH16O75452 317 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 PENKP01210 267 aaPredicted RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 AZGP1P25311 298 aaKnown RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 PRLHRP49683 370 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 TPMTP51580 245 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 HYAL1Q12794 435 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 TRAP1Q12931 704 aaKnown RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 KCNAB2Q13303 367 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 CCNJQ5T5M9 372 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 SPATC1Q76KD6 591 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 OXR1Q8N573 874 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 UXS1Q8NBZ7 420 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 TMIEQ8NEW7 156 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 PSMA8Q8TAA3 256 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 FRS2Q8WU20 508 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 RSPRY1Q96DX4 576 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 OR51I1Q9H343 314 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 NDUFA13Q9P0J0 144 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 MBD1Q9UIS9 605 aaPredicted RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 GPR45Q9Y5Y3 372 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 ATAD5Q96QE3 1844 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 EFCAB10A6NFE3 127 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 SOCS2O14508 198 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 FGF4P08620 206 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 ZNF888P0CJ79 500 aaPredicted RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 SOX6P35712 828 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 CXCL12P48061 93 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 KHKP50053 298 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 SMIM11AP58511 58 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 BNC1Q01954 994 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 NR1D2Q14995 579 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 NKAIN2Q5VXU1 208 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 AFMIDQ63HM1 303 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 Q6ZNB5 142 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 PRR22Q8IZ63 422 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 DEFB123Q8N688 67 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 NUP43Q8NFH3 380 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 OR2L2Q8NH16 312 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 QRSL1Q9H0R6 528 aaKnown RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 C8orf33Q9H7E9 229 aaPredicted RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 THAP10Q9P2Z0 257 aaPredicted RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 COPS7AQ9UBW8 275 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 RIMKLBQ9ULI2 386 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 ARID1AO14497 2285 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 TRPM6Q9BX84 2022 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 LSM1O15116 133 aaKnown RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 TLX2O43763 284 aaPredicted RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 SBK3P0C264 359 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 ACADLP28330 430 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 CSTF2P33240 577 aaKnown RBP eCLIP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 CSNK1DP48730 415 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 MAT1AQ00266 395 aaKnown RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 OR4C11Q6IEV9 310 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 PDZD3Q86UT5 571 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 DEPDC4Q8N2C3 294 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 NRG4Q8WWG1 115 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 ALPK1Q96QP1 1244 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 COPS4Q9BT78 406 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 TBL1XR1Q9BZK7 514 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 SLC6A16Q9GZN6 736 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 DNAJC27Q9NZQ0 273 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 RSL24D1Q9UHA3 163 aaKnown RBP9.12□□□□□ -0.95
TTC39C-203ENST00000540918 PCDHGB3Q9Y5G1 929 aa9.12□□□□□ -0.95
TTC39C-203ENST00000540918 ANHXE9PGG2 379 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 BLOC1S5-TXNDC5H3BN57 136 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 MAN2B1O00754 1011 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 RGS10O43665 173 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 PRAMEF10O60809 474 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 MC3RP41968 323 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 CDKN2CP42773 168 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 RXRGP48443 463 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 BLMHQ13867 455 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 GK3PQ14409 553 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 TMEM196Q5HYL7 178 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 WDR45BQ5MNZ6 344 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 SLC30A6Q6NXT4 461 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 B3GNT6Q6ZMB0 384 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 FAM83HQ6ZRV2 1179 aaPredicted RBP9.11□□□□□ -0.95
TTC39C-203ENST00000540918 ZNF433Q8N7K0 673 aaPredicted RBP9.11□□□□□ -0.95
TTC39C-203ENST00000540918 OR9A2Q8NGT5 310 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 ZNF671Q8TAW3 534 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.11□□□□□ -0.95
TTC39C-203ENST00000540918 SLC6A18Q96N87 628 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 ZNF831Q5JPB2 1677 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 IQCMA0A1B0GVH7 501 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 PPM1DO15297 605 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 B4GAT1O43505 415 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 FCER2P06734 321 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 OR1D4P47884 311 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 RPS3AP61247 264 aaKnown RBP9.11□□□□□ -0.95
TTC39C-203ENST00000540918 TLR1Q15399 786 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 GFOD2Q3B7J2 385 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 TMEM236Q5W0B7 351 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 REEP3Q6NUK4 255 aa9.11□□□□□ -0.95
TTC39C-203ENST00000540918 OR10H4Q8NGA5 316 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms