RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PIP5K1BO14986 540 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 PROM1O43490 865 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 ATP8B1O43520 1251 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 PRMT3O60678 531 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 SKAP2O75563 359 aaPredicted RBP11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 PRKRAO75569 313 aaKnown RBP11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 MAOAP21397 527 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 RAE1P78406 368 aaKnown RBP11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 TNFRSF17Q02223 184 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 CHAF1BQ13112 559 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 CPZQ66K79 652 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 ATG16L1Q676U5 607 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 QSOX2Q6ZRP7 698 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 RNF165Q6ZSG1 346 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 Q6ZSR9 355 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 ANKRD37Q7Z713 158 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 SCUBE1Q8IWY4 988 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 TRIM42Q8IWZ5 723 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 DDIASQ8IXT1 998 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 AMER2Q8N7J2 671 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 RAB3IL1Q8TBN0 382 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 METTL21AQ8WXB1 218 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 ZNF75CPQ92670 426 aaPredicted RBP11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 EXTL1Q92935 676 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 UCN3Q969E3 161 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 NACC2Q96BF6 587 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 IP6K3Q96PC2 410 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 ILKAPQ9H0C8 392 aaPredicted RBP11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 PRDM9Q9NQV7 894 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 PNPOQ9NVS9 261 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 FBXL4Q9UKA2 621 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 MRPS33Q9Y291 106 aaKnown RBP11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 MMACHCQ9Y4U1 282 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 KCNMB2Q9Y691 235 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 SPACA6W5XKT8 324 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 LAMA5O15230 3695 aa11.95□□□□□ -0.5
TSPAN9-207ENST00000539631 ANKRD11Q6UB99 2663 aaPredicted RBP11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 IGHV1-45A0A0A0MS14 117 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 IGHV3-20A0A0C4DH32 117 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 MYOCOSA0A1B0GUC4 107 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 TGFBR3LH3BV60 316 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 ZZEF1O43149 2961 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 RGS14O43566 566 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 PCDH7O60245 1069 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 SNNO75324 88 aaPredicted RBP11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 RSL1D1O76021 490 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 SNUPNO95149 360 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 CYC1P08574 325 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 COX6A1P12074 109 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 ACPPP15309 386 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 NR1D1P20393 614 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 PRPH2P23942 346 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 TIA1P31483 386 aaKnown RBP eCLIP11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 RPL14P50914 215 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 MAPK12P53778 367 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 ACSM2AQ08AH3 577 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 SLC13A2Q13183 592 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 PCOLCEQ15113 449 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 NSDHLQ15738 373 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 LINC00303Q3SY05 128 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 SPIN4Q56A73 249 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 ACSM2BQ68CK6 577 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 BORAQ6PGQ7 559 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 RIPOR1Q6ZS17 1223 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 CPEB2Q7Z5Q1 589 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 CLNKQ7Z7G1 428 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 ZNF595Q8IYB9 648 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 OR11G2Q8NGC1 345 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 DYDC1Q8WWB3 177 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 TTC9Q92623 222 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 C3orf30Q96M34 536 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 EBPLQ9BY08 206 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 TRIM55Q9BYV6 548 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 INTS9Q9NV88 658 aaKnown RBP11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 THAP1Q9NVV9 213 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 TEX10Q9NXF1 929 aaPredicted RBP11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 MS4A12Q9NXJ0 267 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 MCM8Q9UJA3 840 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 HAO1Q9UJM8 370 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 LHX6Q9UPM6 363 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 CLDN16Q9Y5I7 305 aa11.94□□□□□ -0.5
TSPAN9-207ENST00000539631 IGKV3D-11A0A0A0MRZ8 115 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 WASHC1A8K0Z3 465 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 NPIPB8E9PQR5 432 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 CLDN4O14493 209 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 KLF11O14901 512 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 PCDH17O14917 1159 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 CTNSO60931 367 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 LDB3O75112 727 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 SEC22BO75396 215 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 DNAJB5O75953 348 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 AIFM1O95831 613 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 HPP00738 406 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 ITGB2P05107 769 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 JUNP05412 331 aaKnown RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 TLX1P31314 330 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 BUD31P41223 144 aaPredicted RBP11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 HSD17B7P56937 341 aa11.93□□□□□ -0.5
TSPAN9-207ENST00000539631 OR4D2P58180 307 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms