RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 ZNF559Q9BR84 538 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 PIGQQ9BRB3 760 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 PYGO2Q9BRQ0 406 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 EDEM2Q9BV94 578 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 ZNF416Q9BWM5 594 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 MTMR12Q9C0I1 747 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 TMEM117Q9H0C3 514 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 SHARPINQ9H0F6 387 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 ATG10Q9H0Y0 220 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 ATP13A3Q9H7F0 1226 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 DNAJC4Q9NNZ3 241 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 PLCXD1Q9NUJ7 323 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 RNF186Q9NXI6 227 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 HOXC10Q9NYD6 342 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 PCSK1NQ9UHG2 260 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 GRID1Q9ULK0 1009 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 STUB1Q9UNE7 303 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 SNX6Q9UNH7 406 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 NAALAD2Q9Y3Q0 740 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 TMED3Q9Y3Q3 217 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 MAB21L2Q9Y586 359 aa2.79□□□□□ -1.96
CLHC1-213ENST00000494539 NCAPD2Q15021 1401 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 A0A1W2PPK0 400 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 MACROD2A1Z1Q3 448 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 ERICH4A6NGS2 130 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 H7C423 109 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 PRAF2O60831 178 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 MMP10P09238 476 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 TRIM49P0CI25 452 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 TRIM49CP0CI26 452 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 CALCBP10092 127 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 ELAVL4P26378 380 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 PIK3R1P27986 724 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 OTX2P32243 289 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 PTGER4P35408 488 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 HSD17B3P37058 310 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 TAGLN2P37802 199 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 RPL21P46778 160 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 CDX1P47902 265 aaPredicted RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 SLC6A12P48065 614 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 MTTPP55157 894 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 CUL3Q13618 768 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 DDX39BQ13838 428 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 IDI1Q13907 227 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 HNRNPDQ14103 355 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 SQLEQ14534 574 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 HERC3Q15034 1050 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 PTGISQ16647 500 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 CTU2Q2VPK5 515 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 NADK2Q4G0N4 442 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 MCMDC2Q4G0Z9 681 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 FILIP1LQ4L180 1135 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 CFAP157Q5JU67 520 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 PRAMEF7Q5VXH5 474 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 Q6ZSR9 355 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 ASPGQ86U10 573 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 MEX3DQ86XN8 651 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 TMEM126BQ8IUX1 230 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 RAB42Q8N4Z0 105 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 DCLK2Q8N568 766 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 NIPA2Q8N8Q9 360 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 MINDY2Q8NBR6 621 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 KIAA0895Q8NCT3 520 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 OR5AP2Q8NGF4 316 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 GANCQ8TET4 914 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 PIGBQ92521 554 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 FAM46BQ96A09 425 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 C16orf58Q96GQ5 468 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 COG3Q96JB2 828 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 MAGED4Q96JG8 741 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 GPA33Q99795 319 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 CDH20Q9HBT6 801 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 PALMDQ9NP74 551 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 TRPV5Q9NQA5 729 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 FAM207AQ9NSI2 230 aaPredicted RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 ZCCHC3Q9NUD5 404 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 PIGVQ9NUD9 493 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 PANK4Q9NVE7 773 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 DDX18Q9NVP1 670 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 AIPL1Q9NZN9 384 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 RAI14Q9P0K7 980 aa2.78□□□□□ -1.96
CLHC1-213ENST00000494539 MRPS7Q9Y2R9 242 aaKnown RBP2.78□□□□□ -1.96
CLHC1-213ENST00000494539 TTC21BQ7Z4L5 1316 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 IGLV7-46A0A075B6I9 117 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 A0A087X0K7 114 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 ZSCAN5BA6NJL1 495 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 KRTAP16-1A8MUX0 517 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 SLC28A1O00337 649 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 PES1O00541 588 aaKnown RBP2.77□□□□□ -1.97
CLHC1-213ENST00000494539 ARPC2O15144 300 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 TLX2O43763 284 aaPredicted RBP2.77□□□□□ -1.97
CLHC1-213ENST00000494539 TBX19O60806 448 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 GLRA3O75311 464 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 BBOX1O75936 387 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 OR6A2O95222 327 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 EPB41P11171 864 aaKnown RBP2.77□□□□□ -1.97
CLHC1-213ENST00000494539 MYL6BP14649 208 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 ZNF18P17022 549 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 CYP2A7P20853 494 aa2.77□□□□□ -1.97
CLHC1-213ENST00000494539 ZNF10P21506 573 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms