RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 KNTC1P50748 2209 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 COL6A6A6NMZ7 2263 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 URB1O60287 2271 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 A0A0U1RQS6 177 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 FAM92AA1XBS5 289 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 M0QZ24 198 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CDX4O14627 284 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 TSPAN4O14817 238 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 BUD23O43709 281 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CACNG3O60359 315 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 SNAP91O60641 907 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 TBL1XO60907 577 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 SDC3O75056 442 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 APBB3O95704 486 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 APODP05090 189 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 IGHV4-38-2P0DP08 117 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 ATP1A3P13637 1013 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CEACAM1P13688 526 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 TCF4P15884 667 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 PDGFRAP16234 1089 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 PRLRP16471 622 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 GNAZP19086 355 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 MSH3P20585 1137 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 MAT2AP31153 395 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 ACSL1P33121 698 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CSKP41240 450 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 PSMD8P48556 350 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 NOVA1P51513 510 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 RPP30P78346 268 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 PDGFRLQ15198 375 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 GSTA3Q16772 222 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CDO1Q16878 200 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 SGSM1Q2NKQ1 1148 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 C15orf59Q2T9L4 293 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 KRTCAP3Q53RY4 240 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 RAB41Q5JT25 222 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 TPRG1LQ5T0D9 272 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 BSPRYQ5W0U4 402 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 KCTD16Q68DU8 428 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 KRT39Q6A163 491 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 PAPD4Q6PIY7 484 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 LINGO4Q6UY18 593 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 INTS8Q75QN2 995 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CHST9Q7L1S5 443 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 RSRC2Q7L4I2 434 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CCDC186Q7Z3E2 898 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CPOQ8IVL8 374 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CCDC13Q8IYE1 715 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 LGI2Q8N0V4 545 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 DEFB106AQ8N104 65 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CRYBG2Q8N1P7 616 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CARNMT1Q8N4J0 409 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 TRIML1Q8N9V2 468 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 LEMD2Q8NC56 503 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 JOSD2Q8TAC2 188 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 FGFBP3Q8TAT2 258 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 SPATA18Q8TC71 538 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 C2orf15Q8WU43 125 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 FAM222BQ8WU58 562 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 IGSF8Q969P0 613 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 FAM149B1Q96BN6 582 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 SENP5Q96HI0 755 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CPXM1Q96SM3 734 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 HNRNPABQ99729 332 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 TRIM51Q9BSJ1 452 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 MCRIP2Q9BUT9 160 aaKnown RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 GPR63Q9BZJ6 419 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 TRIM7Q9C029 511 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 HSD3B7Q9H2F3 369 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 C8orf33Q9H7E9 229 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 KIF9Q9HAQ2 790 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 MAGEF1Q9HAY2 307 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CSNK1G1Q9HCP0 422 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 UBE2TQ9NPD8 197 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 SLC6A13Q9NSD5 602 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 UXTQ9UBK9 157 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 STK39Q9UEW8 545 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 ARMCX3Q9UH62 379 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-218ENST00000493430 SARDHQ9UL12 918 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 VANGL2Q9ULK5 521 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 SCML2Q9UQR0 700 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 ITM2BQ9Y287 266 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 DGKBQ9Y6T7 804 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 ATP8B3O60423 1300 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CPAMD8Q8IZJ3 1885 aa2.83□□□□□ -1.96
PTCD3-218ENST00000493430 CROCCQ5TZA2 2017 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 A0A0G2JNG1 304 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 A0A1W2PP11 408 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 BCLAF3A2AJT9 711 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 GOLGA6L4A6NEF3 574 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 C5orf60A6NFR6 353 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 MEI4A8MW99 385 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 TMCO5BA8MYB1 307 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PES1O00541 588 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 SLC30A4O14863 429 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 XPO1O14980 1071 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 CETN3O15182 167 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 HOXC11O43248 304 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 RTN2O75298 545 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 GFPT2O94808 682 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms