RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 AMER3Q8N944 861 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 BHLHE22Q8NFJ8 381 aaPredicted RBP9.9□□□□□ -0.82
LINC00173-203ENST00000480237 OR2I1PQ8NGU4 316 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 SLC26A7Q8TE54 656 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 UTP15Q8TED0 518 aaKnown RBP9.9□□□□□ -0.82
LINC00173-203ENST00000480237 SAP25Q8TEE9 199 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 CCDC74AQ96AQ1 378 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 CIDECQ96AQ7 238 aaPredicted RBP9.9□□□□□ -0.82
LINC00173-203ENST00000480237 MIEF2Q96C03 454 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 TM4SF18Q96CE8 201 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 TCTN2Q96GX1 697 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 CCDC115Q96NT0 180 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 SH3GL1Q99961 368 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 ECSITQ9BQ95 431 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 CPPED1Q9BRF8 314 aaPredicted RBP9.9□□□□□ -0.82
LINC00173-203ENST00000480237 THUMPD3Q9BV44 507 aaKnown RBP9.9□□□□□ -0.82
LINC00173-203ENST00000480237 GTPBP2Q9BX10 602 aaKnown RBP9.9□□□□□ -0.82
LINC00173-203ENST00000480237 ROGDIQ9GZN7 287 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 RASSF4Q9H2L5 321 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 PRDM7Q9NQW5 492 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 IRAK4Q9NWZ3 460 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 TEX10Q9NXF1 929 aaPredicted RBP9.9□□□□□ -0.82
LINC00173-203ENST00000480237 CD300AQ9UGN4 299 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 BTNL2Q9UIR0 455 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 PRDM4Q9UKN5 801 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 FBXW2Q9UKT8 454 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 RAB23Q9ULC3 237 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 VPS4AQ9UN37 437 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 PCDHGB4Q9UN71 923 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 BTBD3Q9Y2F9 522 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 NEUROG3Q9Y4Z2 214 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 PCDHB14Q9Y5E9 798 aa9.9□□□□□ -0.82
LINC00173-203ENST00000480237 TRBV5-3A0A0A0MS03 114 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 PRSS51A0A1B0GVH4 220 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 FAM86C2PA6NEL3 165 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 RNASET2O00584 256 aaKnown RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 ZSCAN9O15535 394 aaPredicted RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 KIF1CO43896 1103 aaKnown RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 BCAS2O75934 225 aaPredicted RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 ABCB1P08183 1280 aaPredicted RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 MPLP40238 635 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 HNRNPFP52597 415 aaKnown RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 CCNIQ14094 377 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 TRIM25Q14258 630 aaKnown RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 NR1D2Q14995 579 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 RCN1Q15293 331 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 RUNDC3AQ59EK9 446 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 NDUFAF5Q5TEU4 345 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 ZNF621Q6ZSS3 439 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 PLXDC1Q8IUK5 500 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 MSRB3Q8IXL7 192 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 FAM47BQ8NA70 645 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 OR6C4Q8NGE1 309 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 N4BP2L2Q92802 583 aaPredicted RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 EXOSC8Q96B26 276 aaKnown RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 AURKBQ96GD4 344 aaPredicted RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 RSRC1Q96IZ7 334 aaKnown RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 LRGUKQ96M69 825 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 TRIM15Q9C019 465 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 RAB33BQ9H082 229 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 PCDHAC1Q9H158 963 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 MUC13Q9H3R2 512 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 DCLRE1BQ9H816 532 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 FAM60AQ9NP50 221 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 SLC6A13Q9NSD5 602 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 SLC25A37Q9NYZ2 338 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 C5AR2Q9P296 337 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 ZNF282Q9UDV7 671 aaPredicted RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 EPHA6Q9UF33 1036 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 PHF11Q9UIL8 331 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 AP3M1Q9Y2T2 418 aa9.89□□□□□ -0.83
LINC00173-203ENST00000480237 MN1Q10571 1320 aaPredicted RBP9.89□□□□□ -0.83
LINC00173-203ENST00000480237 CPED1A4D0V7 1026 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 FIGNL2A6NMB9 653 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 EVPLLA8MZ36 301 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 TXNDC9O14530 226 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 SIGLEC6O43699 453 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 B3GALT2O43825 422 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 TBX19O60806 448 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 SCN2BO60939 215 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 FKBP6O75344 327 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 SCELO95171 688 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 ZBTB11O95625 1053 aaPredicted RBP9.88□□□□□ -0.83
LINC00173-203ENST00000480237 C6orf47O95873 294 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 NR2F6P10588 404 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 DRD2P14416 443 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 HOXB9P17482 250 aaPredicted RBP9.88□□□□□ -0.83
LINC00173-203ENST00000480237 ALOX12P18054 663 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 IL1RNP18510 177 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 PTPN6P29350 595 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 CSF2RBP32927 897 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 SOAT1P35610 550 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 ARL4DP49703 201 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 AP2B1P63010 937 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 MS4A2Q01362 244 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 TRAP1Q12931 704 aaKnown RBP9.88□□□□□ -0.83
LINC00173-203ENST00000480237 DEFB134Q4QY38 66 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 SNAP47Q5SQN1 464 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 SPRED1Q7Z699 444 aa9.88□□□□□ -0.83
LINC00173-203ENST00000480237 SPATA24Q86W54 205 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms