RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 DNAJC27Q9NZQ0 273 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 GIMAP2Q9UG22 337 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 RARRES3Q9UL19 164 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 XRN1Q8IZH2 1706 aaKnown RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF217O75362 1048 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF821O75541 412 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 CDRT1O95170 752 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TAS2R43P59537 309 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 HNRNPKP61978 463 aaKnown RBP eCLIP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 FBXO46Q6PJ61 603 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 FOXJ1Q92949 421 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TAMM41Q96BW9 452 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 MRGPRX2Q96LB1 330 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 PAAF1Q9BRP4 392 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TMEM121BQ9BXQ6 578 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 MGAT4BQ9UQ53 548 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TEX13DA0A0J9YY54 714 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 NPPAP01160 153 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 MT-ND5P03915 603 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 RPS3AP61247 264 aaKnown RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SEC23BQ15437 767 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TAS1R3Q7RTX0 852 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 FAM3CQ92520 227 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 IL17FQ96PD4 163 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 NAA11Q9BSU3 229 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 DCSTAMPQ9H295 470 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ERVK-18Q9QC07 812 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ABCD2Q9UBJ2 740 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 H0YJX3 145 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 SEMA4FO95754 770 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 H2BFMP0C1H6 154 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 SRCP12931 536 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 DSG2Q14126 1118 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 PLXDC1Q8IUK5 500 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 UBQLNLQ8IYU4 475 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 APCDD1Q8J025 514 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 OR2L2Q8NH16 312 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 DPAGT1Q9H3H5 408 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 TOR3AQ9H497 397 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 PROM1O43490 865 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 APBB3O95704 486 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 TIMP1P01033 207 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 HLA-DPB1P04440 258 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 ATF6P18850 670 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 LRIT3Q3SXY7 679 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 RTP2Q5QGT7 225 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 TREML1Q86YW5 311 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 LRRC25Q8N386 305 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 DNAAF1Q8NEP3 725 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 TRIB3Q96RU7 358 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 DPH7Q9BTV6 452 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 PTTG2Q9NZH5 202 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 OR1A2Q9Y585 309 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 EMC8O43402 210 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 DFNA5O60443 496 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 RNH1P13489 461 aaKnown RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 VEGFBP49765 207 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 RABL3Q5HYI8 236 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF382Q96SR6 550 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF471Q9BX82 626 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 YTHDF1Q9BYJ9 559 aaKnown RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 WDR6Q9NNW5 1121 aaKnown RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 UCKL1Q9NWZ5 548 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 HCN4Q9Y3Q4 1203 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 BACE2Q9Y5Z0 518 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 CPNE6O95741 557 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF865P0CJ78 1059 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 BCKDHAP12694 445 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 VAMP1P23763 118 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 RABIFP47224 123 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 EIF4HQ15056 248 aaKnown RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 KIAA0319Q5VV43 1072 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 CARM1Q86X55 608 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF689Q96CS4 500 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 PKP2Q99959 881 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 HSD3B7Q9H2F3 369 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 C13orf42A0A1B0GVH6 325 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF487B1APH4 448 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 DISC1C4P0D8 188 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF12P17014 697 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 PRKACGP22612 351 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 SLC15A1P46059 708 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 SLC18A2Q05940 514 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 LAPTM4AQ15012 233 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 CATSPEREQ5SY80 951 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 C10orf62Q5T681 223 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 MAMDC4Q6UXC1 1216 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 TMED4Q7Z7H5 227 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 NLGN4XQ8N0W4 816 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 TCEANCQ8N8B7 351 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 S100A16Q96FQ6 103 aaKnown RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 PELOQ9BRX2 385 aaKnown RBP9.98□□□□□ -0.81
COL4A6-203ENST00000394872 KCNK13Q9HB14 408 aa9.98□□□□□ -0.81
COL4A6-203ENST00000394872 C1orf226A1L170 272 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 JUPP14923 745 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 HHEXQ03014 270 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 MVKQ03426 396 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 BLMHQ13867 455 aa9.97□□□□□ -0.81
COL4A6-203ENST00000394872 SWT1Q5T5J6 900 aaKnown RBP9.97□□□□□ -0.81
COL4A6-203ENST00000394872 LRRC69Q6ZNQ3 347 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms