RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LYSMD2Q8IV50 215 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CCDC116Q8IYX3 515 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DYNC2LI1Q8TCX1 351 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 USP7Q93009 1102 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GLYATL1Q969I3 302 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TMEM19Q96HH6 336 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SAMD11Q96NU1 681 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TM9SF2Q99805 663 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 WACQ9BTA9 647 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RACGAP1Q9H0H5 632 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ABCG4Q9H172 646 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SP140LQ9H930 580 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ISM1B1AKI9 464 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ANHXE9PGG2 379 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RFXAPO00287 272 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 LRRTM2O43300 516 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 JRKO75564 520 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ACP5P13686 325 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CLCNKAP51800 687 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ITGA1P56199 1179 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ID2Q02363 134 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZMAT1Q5H9K5 638 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 FAM124AQ86V42 546 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 LAX1Q8IWV1 398 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DNAJC22Q8N4W6 341 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RASGEF1AQ8N9B8 481 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 KCT2Q8NC54 265 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TEX47Q8TBZ9 253 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C2orf15Q8WU43 125 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF480Q8WV37 535 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 FKBP10Q96AY3 582 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RAD51AP1Q96B01 352 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 LRR1Q96L50 414 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C1QTNF3Q9BXJ4 246 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLC46A2Q9BY10 475 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZCCHC2Q9C0B9 1178 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DUSP21Q9H596 190 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GSTK1Q9Y2Q3 226 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 UGT2A1Q9Y4X1 527 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 WBP4O75554 376 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TNFSF8P32971 234 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GGT2P36268 569 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SCN1BQ07699 218 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 KEAP1Q14145 624 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 KIAA0040Q15053 153 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PRAMEF14Q5SWL7 426 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PRAMEF13Q5VWM6 474 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DNAJB8Q8NHS0 232 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF607Q96SK3 696 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLC6A16Q9GZN6 736 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SRRDQ9UH36 339 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF222Q9UK12 451 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 KCNK6Q9Y257 313 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 YARS2Q9Y2Z4 477 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PARP14Q460N5 1801 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PDPK1O15530 556 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CDK1P06493 297 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CBSLP0DN79 551 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CD22P20273 847 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RPS3P23396 243 aaKnown RBP eCLIP13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CBSP35520 551 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RORCP51449 518 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RACK1P63244 317 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TUBA1BP68363 451 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GBX1Q14549 363 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SPIN4Q56A73 249 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SYT6Q5T7P8 510 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TUBA1AQ71U36 451 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 OR5AR1Q8NGP9 310 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TFGQ92734 400 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PIP5K1AQ99755 562 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GPSM3Q9Y4H4 160 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PAPPA2Q9BXP8 1791 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 H7C0S8 307 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ARHGAP33O14559 1287 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SOD2P04179 222 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 EPHX1P07099 455 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CCNYL3P0C7X3 344 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CD9P21926 228 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GRK5P34947 590 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NRIP1P48552 1158 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CCT3P49368 545 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DGKGP49619 791 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NCBP2P52298 156 aaKnown RBP eCLIP13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CHPFQ8IZ52 775 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZCCHC10Q8TBK6 192 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLC5A11Q8WWX8 675 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLC35G4P0C7Q5 338 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ITGAMP11215 1152 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CHMP24386 653 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 MICAQ29983 383 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 LIPJQ5W064 366 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 LAIR2Q6ISS4 152 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CCDC80Q76M96 950 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C16orf78Q8WTQ4 265 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZFP3Q96NJ6 502 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DOK1Q99704 481 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SMURF1Q9HCE7 757 aa13.74□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ENTPD4Q9Y227 616 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms