RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 KCNC4Q03721 635 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 MXD1Q05195 221 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 TECPR1Q7Z6L1 1165 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 WDR20Q8TBZ3 569 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 P2RX2Q9UBL9 471 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 FBXO10Q9UK96 956 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 IRAK3Q9Y616 596 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 AP3D1O14617 1153 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 CMPK1P30085 196 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 XKP51811 444 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 RGS1Q08116 209 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 CST6Q15828 149 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 ZNF385BQ569K4 471 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 ZNF730Q6ZMV8 503 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 NLGN4XQ8N0W4 816 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 OR2L2Q8NH16 312 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 OR8K5Q8NH50 307 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 NDNFQ8TB73 568 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 DOK4Q8TEW6 326 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 CHTF18Q8WVB6 975 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 RPL3LQ92901 407 aaKnown RBP10.68□□□□□ -0.7
SSU72-202ENST00000359060 RNF6Q9Y252 685 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 MICAL3Q7RTP6 2002 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 SCN5AQ14524 2016 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 A0A1W2PQU0 124 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 UPK1AO00322 258 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 RPLP0P05388 317 aaKnown RBP10.68□□□□□ -0.7
SSU72-202ENST00000359060 PSMA3P25788 255 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 TLX1P31314 330 aaPredicted RBP10.68□□□□□ -0.7
SSU72-202ENST00000359060 RYKP34925 604 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 HSD17B2P37059 387 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 PIK3CBP42338 1070 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 AVPR1BP47901 424 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 CRISP3P54108 245 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 RGS8P57771 180 aaPredicted RBP10.68□□□□□ -0.7
SSU72-202ENST00000359060 C10orf62Q5T681 223 aaPredicted RBP10.68□□□□□ -0.7
SSU72-202ENST00000359060 TEX47Q8TBZ9 253 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 OR5P2Q8WZ92 322 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 TAMM41Q96BW9 452 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 PRDM8Q9NQV8 689 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 ZNF232Q9UNY5 417 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 PPIL1Q9Y3C6 166 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 STON1Q9Y6Q2 735 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 ANKRD36A6QL64 1941 aa10.68□□□□□ -0.7
SSU72-202ENST00000359060 AGAP14A8MT82 685 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 ANHXE9PGG2 379 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 TLR4O00206 839 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 P2RY2P41231 377 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 CLK3P49761 638 aaKnown RBP10.67□□□□□ -0.7
SSU72-202ENST00000359060 FCHO2Q0JRZ9 810 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 DNASE1L3Q13609 305 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 CRB2Q5IJ48 1285 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 CLEC12AQ5QGZ9 265 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 UNC5DQ6UXZ4 953 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 SPRED2Q7Z698 418 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 PDZD3Q86UT5 571 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 PTOV1Q86YD1 416 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 TCEANCQ8N8B7 351 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 FCGR1BQ92637 280 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 KCNS3Q9BQ31 491 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 DPH7Q9BTV6 452 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 SPATA9Q9BWV2 254 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 UCK2Q9BZX2 261 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 KCNE1BA0A087WTH5 132 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 LINC01553A4QN01 128 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 PCDH17O14917 1159 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 APOL3O95236 402 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 FURINP09958 794 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 IFNGR2P38484 337 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 CDK3Q00526 305 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.67□□□□□ -0.7
SSU72-202ENST00000359060 GNA13Q14344 377 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 TSTQ16762 297 aaKnown RBP10.67□□□□□ -0.7
SSU72-202ENST00000359060 PROX2Q3B8N5 592 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 TOR1AIP1Q5JTV8 583 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 ARMC4Q5T2S8 1044 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 FBXO46Q6PJ61 603 aaPredicted RBP10.67□□□□□ -0.7
SSU72-202ENST00000359060 SNX29P2Q8IUI4 249 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 CYP4Z2PQ8N1L4 340 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 SRFBP1Q8NEF9 429 aaKnown RBP10.67□□□□□ -0.7
SSU72-202ENST00000359060 TBC1D15Q8TC07 691 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 RAB7BQ96AH8 199 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 RHNO1Q9BSD3 238 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 CNPPD1Q9BV87 410 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 DPEP2Q9H4A9 486 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 RC3H2Q9HBD1 1191 aaKnown RBP10.67□□□□□ -0.7
SSU72-202ENST00000359060 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 ENPP4Q9Y6X5 453 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 PTPRDP23468 1912 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 TRPM6Q9BX84 2022 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 CHD5Q8TDI0 1954 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 JRKO75564 520 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 CKMT1AP12532 417 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 CSNK2A2P19784 350 aaPredicted RBP10.67□□□□□ -0.7
SSU72-202ENST00000359060 ITIH1P19827 911 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 BTN3A2P78410 334 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 PRR5P85299 388 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 PLEKHM3Q6ZWE6 761 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 SLC9B2Q86UD5 537 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 GATAD2AQ86YP4 633 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms