RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 IRAK4Q9NWZ3 460 aa17.07■□□□□ 0.32
VRK3-225ENST00000601912 CMTM6Q9NX76 183 aa17.07■□□□□ 0.32
VRK3-225ENST00000601912 SEMA5BQ9P283 1151 aa17.07■□□□□ 0.32
VRK3-225ENST00000601912 CD300AQ9UGN4 299 aa17.07■□□□□ 0.32
VRK3-225ENST00000601912 BCAP29Q9UHQ4 241 aa17.07■□□□□ 0.32
VRK3-225ENST00000601912 PHF11Q9UIL8 331 aa17.07■□□□□ 0.32
VRK3-225ENST00000601912 FBXW2Q9UKT8 454 aa17.07■□□□□ 0.32
VRK3-225ENST00000601912 AP3M1Q9Y2T2 418 aa17.07■□□□□ 0.32
VRK3-225ENST00000601912 PCDHB14Q9Y5E9 798 aa17.07■□□□□ 0.32
VRK3-225ENST00000601912 CROCCQ5TZA2 2017 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 UNC13CQ8NB66 2214 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 C1orf226A1L170 272 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 PRORSD1PA6NEY8 169 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 NME4O00746 187 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 MGRN1O60291 552 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 CPNE6O95741 557 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 RETP07949 1114 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 TCN1P20061 433 aaPredicted RBP17.06■□□□□ 0.32
VRK3-225ENST00000601912 GRK6P43250 576 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 SEPHS1P49903 392 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 SKP1P63208 163 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 KPNB1Q14974 876 aaKnown RBP17.06■□□□□ 0.32
VRK3-225ENST00000601912 PRTGQ2VWP7 1150 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 PROX2Q3B8N5 592 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 RABL3Q5HYI8 236 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 TMTC4Q5T4D3 741 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 CLECL1Q8IZS7 167 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 MMP21Q8N119 569 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 WDR60Q8WVS4 1066 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 DPYSL5Q9BPU6 564 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 NUDT22Q9BRQ3 303 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 THUMPD3Q9BV44 507 aaKnown RBP17.06■□□□□ 0.32
VRK3-225ENST00000601912 DNAAF2Q9NVR5 837 aaKnown RBP17.06■□□□□ 0.32
VRK3-225ENST00000601912 MS4A12Q9NXJ0 267 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 TAS2R7Q9NYW3 318 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 SUCOQ9UBS9 1254 aaKnown RBP17.06■□□□□ 0.32
VRK3-225ENST00000601912 ATG4BQ9Y4P1 393 aa17.06■□□□□ 0.32
VRK3-225ENST00000601912 A0A1W2PR48 441 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 LNP1A1A4G5 178 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 PROM1O43490 865 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 DNAJA2O60884 412 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 SORBS2O94875 1100 aaKnown RBP17.05■□□□□ 0.32
VRK3-225ENST00000601912 RPLP0P05388 317 aaKnown RBP17.05■□□□□ 0.32
VRK3-225ENST00000601912 GSNP06396 782 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 HSD17B1P14061 328 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 BUD31P41223 144 aaPredicted RBP17.05■□□□□ 0.32
VRK3-225ENST00000601912 GABRA4P48169 554 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 EEFSECP57772 596 aaKnown RBP17.05■□□□□ 0.32
VRK3-225ENST00000601912 RUNDC3AQ59EK9 446 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 NIPAL1Q6NVV3 410 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 ZNF621Q6ZSS3 439 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 IFI44Q8TCB0 444 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 CIDECQ96AQ7 238 aaPredicted RBP17.05■□□□□ 0.32
VRK3-225ENST00000601912 ZNF285Q96NJ3 590 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 MAPKAP1Q9BPZ7 522 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 ECSITQ9BQ95 431 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 LRRN3Q9H3W5 708 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 ANKHQ9HCJ1 492 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 SLC25A37Q9NYZ2 338 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 TMEM9Q9P0T7 183 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 VPS4AQ9UN37 437 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 SPACA6W5XKT8 324 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 ASXL3Q9C0F0 2248 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 RP1P56715 2156 aa17.05■□□□□ 0.32
VRK3-225ENST00000601912 TRBV5-3A0A0A0MS03 114 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 A0A1W2PRB8 838 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 A8MU76 341 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 PDPK1O15530 556 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 GALR3O60755 368 aaPredicted RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 STAMBPO95630 424 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 EFNA1P20827 205 aaPredicted RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 TLX1P31314 330 aaPredicted RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 CDKN2CP42773 168 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 MTPNP58546 118 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 ACTR3P61158 418 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 CCL7P80098 99 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 RIPK1Q13546 671 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 TRIM25Q14258 630 aaKnown RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 MUM1Q2TAK8 710 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 GARNL3Q5VVW2 1013 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 C10orf67Q8IYJ2 551 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 D2HGDHQ8N465 521 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 OR4A15Q8NGL6 344 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 EXOSC8Q96B26 276 aaKnown RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 ASB9Q96DX5 294 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 SLC41A2Q96JW4 573 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 TRIM8Q9BZR9 551 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 ALG2Q9H553 416 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 LYRM4Q9HD34 91 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 MRPS2Q9Y399 296 aaKnown RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 NAALAD2Q9Y3Q0 740 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 EVPLLA8MZ36 301 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 AIFM1O95831 613 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 ZCCHC18P0CG32 403 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 NR2F6P10588 404 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 IL1RNP18510 177 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 CPN2P22792 545 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 PTPN6P29350 595 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 LIPEQ05469 1076 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 CLPPQ16740 277 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms