RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 FBXO44Q9H4M3 255 aa15.02■□□□□ -0
SYNE3-203ENST00000554873 PDFQ9HBH1 243 aa15.02■□□□□ -0
SYNE3-203ENST00000554873 ZNF226Q9NYT6 803 aa15.02■□□□□ -0
SYNE3-203ENST00000554873 KCMF1Q9P0J7 381 aa15.02■□□□□ -0
SYNE3-203ENST00000554873 CDH10Q9Y6N8 788 aa15.02■□□□□ -0
SYNE3-203ENST00000554873 MFSD2BA6NFX1 497 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 FAM170BA6NMN3 283 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 TRIM23P36406 574 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 CRYBB2P43320 205 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 RGRP47804 291 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 IDH2P48735 452 aaKnown RBP15.02□□□□□ -0.01
SYNE3-203ENST00000554873 ZNF81P51508 661 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 IL2P60568 153 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 SF3A2Q15428 464 aaKnown RBP15.02□□□□□ -0.01
SYNE3-203ENST00000554873 GTDC1Q4AE62 458 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 CYP27C1Q4G0S4 372 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 RFTN2Q52LD8 501 aaPredicted RBP15.02□□□□□ -0.01
SYNE3-203ENST00000554873 CTSL3PQ5NE16 218 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 ZNF648Q5T619 568 aaPredicted RBP15.02□□□□□ -0.01
SYNE3-203ENST00000554873 PSAPL1Q6NUJ1 521 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 TMEM107Q6UX40 140 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 ZNF704Q6ZNC4 412 aaPredicted RBP15.02□□□□□ -0.01
SYNE3-203ENST00000554873 GLT6D1Q7Z4J2 308 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 TMEM151BQ8IW70 566 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 SLC44A2Q8IWA5 706 aaPredicted RBP15.02□□□□□ -0.01
SYNE3-203ENST00000554873 CLDN22Q8N7P3 220 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 CLRN3Q8NCR9 226 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 OR4F6Q8NGB9 312 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 WDR36Q8NI36 951 aaKnown RBP15.02□□□□□ -0.01
SYNE3-203ENST00000554873 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.02□□□□□ -0.01
SYNE3-203ENST00000554873 YIPF5Q969M3 257 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 PARK7Q99497 189 aaKnown RBP15.02□□□□□ -0.01
SYNE3-203ENST00000554873 NPAS1Q99742 590 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 MS4A12Q9NXJ0 267 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 STUB1Q9UNE7 303 aa15.02□□□□□ -0.01
SYNE3-203ENST00000554873 A0A0A6YYJ9 748 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 LOC102723532A0A0G2JNH3 316 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 A0A0U1RQF3 1178 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 SLC22A23A1A5C7 686 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 HLA-EP13747 358 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 RPL35P42766 123 aaKnown RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 ALDH9A1P49189 494 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 VLDLRP98155 873 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 CDH18Q13634 790 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 FAM174BQ3ZCQ3 159 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 RGMBQ6NW40 437 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 LUZP2Q86TE4 346 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 FAM217AQ8IXS0 508 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 CFAP52Q8N1V2 620 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 MS4A15Q8N5U1 240 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 CD200R1Q8TD46 325 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 CHTF18Q8WVB6 975 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 NT5DC2Q9H857 520 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 MARCH2Q9P0N8 246 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 CFAP20Q9Y6A4 193 aaKnown RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 TRBV5-3A0A0A0MS03 114 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 B4GALT3O60512 393 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 CDRT1O95170 752 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 PRAMEF1O95521 474 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 IL1AP01583 271 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 APEX1P27695 318 aaKnown RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 AKR1D1P51857 326 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 ITGA1P56199 1179 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 MXD1Q05195 221 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 PUDPQ08623 228 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 HNRNPA0Q13151 305 aaKnown RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 IRF5Q13568 498 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 NR6A1Q15406 480 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 AP5B1Q2VPB7 878 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 LGALSLQ3ZCW2 172 aaPredicted RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 CHMP1BQ7LBR1 199 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 TTC9BQ8N6N2 239 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 ZNF655Q8N720 491 aaPredicted RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 TMEM145Q8NBT3 493 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 OR6C4Q8NGE1 309 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 UCN3Q969E3 161 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 DPYSL5Q9BPU6 564 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 ANKRA2Q9H9E1 313 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 SLC28A3Q9HAS3 691 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 CNOT2Q9NZN8 540 aaKnown RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 SH3BP4Q9P0V3 963 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 PLEKHB1Q9UF11 243 aaPredicted RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 ZNF222Q9UK12 451 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 PCDHB8Q9UN66 801 aa15.01□□□□□ -0.01
SYNE3-203ENST00000554873 FNDC3AQ9Y2H6 1198 aaKnown RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 DNMT3AQ9Y6K1 912 aaPredicted RBP15.01□□□□□ -0.01
SYNE3-203ENST00000554873 HYKKA2RU49 373 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 MOXD2PA6NHM9 499 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 CBX4O00257 560 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 SEMG1P04279 462 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 ANXA3P12429 323 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 DOC2BQ14184 412 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 TAF1AQ15573 450 aaPredicted RBP15□□□□□ -0.01
SYNE3-203ENST00000554873 C10orf120Q5SQS8 335 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 ALG1LQ6GMV1 187 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 CXCL17Q6UXB2 119 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 C10orf111Q8N326 155 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 NXPE3Q969Y0 559 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 ADAM2Q99965 735 aa15□□□□□ -0.01
SYNE3-203ENST00000554873 CPPED1Q9BRF8 314 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms