RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TMEM44Q2T9K0 475 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 C18orf21Q32NC0 220 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 PTCHD3Q3KNS1 767 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 LRIT3Q3SXY7 679 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 MPPE1Q53F39 396 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 SGO1Q5FBB7 561 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 ARMCX4Q5H9R4 360 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 TMEM236Q5W0B7 351 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 PLAG1Q6DJT9 500 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 THOC7Q6I9Y2 204 aaKnown RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 KIAA1211LQ6NV74 962 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 SYCE2Q6PIF2 218 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 RNF180Q86T96 592 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 FAM124AQ86V42 546 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 HEATR4Q86WZ0 1026 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CCDC71Q8IV32 467 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CCDC103Q8IW40 242 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 METTL4Q8N3J2 472 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CLDN22Q8N7P3 220 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 GDPD1Q8N9F7 314 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 FAM181AQ8N9Y4 354 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 FAM46DQ8NEK8 389 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 OR2AP1Q8NGE2 309 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 WDR20Q8TBZ3 569 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 NUDT8Q8WV74 236 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 C17orf50Q8WW18 174 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 DNASE1L2Q92874 299 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 EID2BQ96D98 161 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 ASIC4Q96FT7 647 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 EXOC2Q96KP1 924 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 HBEGFQ99075 208 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 FEVQ99581 238 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 PIP5K1AQ99755 562 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 MED18Q9BUE0 208 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 EFCAB11Q9BUY7 163 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 TAPBPLQ9BX59 468 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 EPHX3Q9H6B9 360 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 SLA2Q9H6Q3 261 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 FZD3Q9NPG1 666 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 SLC6A13Q9NSD5 602 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 FARSBQ9NSD9 589 aaKnown RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 EXD2Q9NVH0 621 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 EHD3Q9NZN3 535 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 NDUFAF4Q9P032 175 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 GULP1Q9UBP9 304 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 REV1Q9UBZ9 1251 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF221Q9UK13 617 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 ADAM30Q9UKF2 790 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 UTS2RQ9UKP6 389 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 FZD4Q9ULV1 537 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 DUSP12Q9UNI6 340 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 ICKQ9UPZ9 632 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 MGAT4BQ9UQ53 548 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 BTBD3Q9Y2F9 522 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 PRSS21Q9Y6M0 314 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 ENPP4Q9Y6X5 453 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 TDRD15B5MCY1 1934 aaKnown RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 MICAL3Q7RTP6 2002 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 HMX3A6NHT5 357 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ZAR1LA6NP61 321 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 FADS2P1A8MWK0 482 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 C1QTNF9BB2RNN3 333 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 hCG_2039718K7EN88 272 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 DSCR3O14972 297 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 TBX1O43435 398 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 SMAD6O43541 496 aaKnown RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 IDH3BO43837 385 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 B4GALT3O60512 393 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 TBL1XO60907 577 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 PSIP1O75475 530 aaKnown RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CCNKO75909 580 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ABLIM3O94929 683 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 POP4O95707 220 aaKnown RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 OLFM2O95897 454 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 EFEMP2O95967 443 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 IL1AP01583 271 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CKMT1AP12532 417 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CYP4B1P13584 511 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ATP1B2P14415 290 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF24P17028 368 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 HMGA1P17096 107 aaKnown RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CBLP22681 906 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CFL1P23528 166 aaKnown RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 PSMA1P25786 263 aaKnown RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 MAOBP27338 520 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 TIA1P31483 386 aaKnown RBP eCLIP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CCR7P32248 378 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CSTF2P33240 577 aaKnown RBP eCLIP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 CDKN2CP42773 168 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 GDF5P43026 501 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 XCR1P46094 333 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ARL4DP49703 201 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 RORCP51449 518 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 RAB25P57735 213 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 PLIN5Q00G26 463 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 IL1RL1Q01638 556 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ALDH6A1Q02252 535 aaKnown RBP6.19□□□□□ -1.42
SNHG1-225ENST00000545920 SCN1BQ07699 218 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF763Q0D2J5 394 aa6.19□□□□□ -1.42
SNHG1-225ENST00000545920 ST3GAL4Q11206 333 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms