RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SIGIRRQ6IA17 410 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 EIF3MQ7L2H7 374 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 ZNF367Q7RTV3 350 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RABEPKQ7Z6M1 372 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 ADAMTSL2Q86TH1 951 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 ZSWIM9Q86XI8 627 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RAB43Q86YS6 212 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 PLCZ1Q86YW0 608 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 MSRB3Q8IXL7 192 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RYBPQ8N488 228 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TTC9BQ8N6N2 239 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 LSM14AQ8ND56 463 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 PSD4Q8NDX1 1056 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CNIH3Q8TBE1 160 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 UBTD2Q8WUN7 234 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 HTRA1Q92743 480 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RPL3LQ92901 407 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 NCLNQ969V3 563 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RELTQ969Z4 430 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TESCQ96BS2 214 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 FAM120BQ96EK7 910 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 SLC39A13Q96H72 371 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 FUBP3Q96I24 572 aaKnown RBP eCLIP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 ST6GAL2Q96JF0 529 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 RPL10LQ96L21 214 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 MAGEB10Q96LZ2 347 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 NTMT1Q9BV86 223 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CDCA4Q9BXL8 241 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 ZYG11BQ9C0D3 744 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 POLR1EQ9GZS1 481 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CLPBQ9H078 707 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 NIPAL2Q9H841 368 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 NT5MQ9NPB1 228 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 DYRK4Q9NR20 520 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 FBXL12Q9NXK8 326 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CNOT2Q9NZN8 540 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TBC1D14Q9P2M4 693 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TRPS1Q9UHF7 1281 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 SLCO3A1Q9UIG8 710 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 TRMT6Q9UJA5 497 aaKnown RBP7.35□□□□□ -1.23
CCDC60-204ENST00000539847 MAPRE3Q9UPY8 281 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CRYL1Q9Y2S2 319 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 CROCCQ5TZA2 2017 aa7.35□□□□□ -1.23
CCDC60-204ENST00000539847 MYO18AQ92614 2054 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ASPMQ8IZT6 3477 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 GON4LQ3T8J9 2241 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ASCC3Q8N3C0 2202 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ELOA3CA0A087WX78 387 aaPredicted RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 A0A1B0GTL3 188 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 EFCAB10A6NFE3 127 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ELOA3DA6NLF2 546 aaPredicted RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 C1QTNF9BB2RNN3 333 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 C9JVG2 144 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 CDC7O00311 574 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 CDX4O14627 284 aaPredicted RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 MPZL2O60487 215 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 GUCY1B2O75343 617 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 WBP4O75554 376 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 SEMA3DO95025 777 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PGLSO95336 258 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 NFATC1O95644 943 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 LGI1O95970 557 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 SERPINA1P01009 418 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 SLC4A1P02730 911 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 C9P02748 559 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ALPPP05187 535 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 CAPN1P07384 714 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ABCB1P08183 1280 aaPredicted RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 HMBSP08397 361 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 C1QTNF9P0C862 333 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 EBLN1P0CF75 366 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ANXA8P13928 327 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 SLC2A4P14672 509 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 NME1P15531 152 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PRKCAP17252 672 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PRKACGP22612 351 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 NR4A1P22736 598 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ERP29P30040 261 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PRDX3P30048 256 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 FMO3P31513 532 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 GGT2P36268 569 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 LIPAP38571 399 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PTGER3P43115 390 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 NR4A2P43354 598 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ZNF140P52738 457 aaPredicted RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 IST1P53990 364 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 C21orf58P58505 322 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 MRPS21P82921 87 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 CSTF3Q12996 717 aaKnown RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ZNF77Q15935 545 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 HKDC1Q2TB90 917 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ELOA3BQ3SY89 546 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 INO80DQ53TQ3 878 aaPredicted RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 CARD16Q5EG05 197 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 COLEC12Q5KU26 742 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 WIPI1Q5MNZ9 446 aaPredicted RBP7.34□□□□□ -1.23
CCDC60-204ENST00000539847 ATAD3CQ5T2N8 411 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 PIK3R6Q5UE93 754 aa7.34□□□□□ -1.23
CCDC60-204ENST00000539847 LRRC66Q68CR7 880 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms