RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 NECTIN4Q96NY8 510 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 TIGARQ9NQ88 270 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CCL26Q9Y258 94 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 LYVE1Q9Y5Y7 322 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 SCN2BO60939 215 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 OR7A10O76100 309 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 ZNF682O95780 498 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 MSL3P1P0C860 447 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 TIMP2P16035 220 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 IGFBP5P24593 272 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 KDELR2P33947 212 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 ETV6P41212 452 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 IL12RB1P42701 662 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CTSKP43235 329 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 DOC2AQ14183 400 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 FAM122CQ6P4D5 195 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 AGTRAPQ6RW13 159 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 ZNF621Q6ZSS3 439 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 Q6ZVL8 140 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 DPPA4Q7L190 304 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CAMKMTQ7Z624 323 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CCDC190Q86UF4 302 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 AMIGO1Q86WK6 493 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 ZZZ3Q8IYH5 903 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CHPFQ8IZ52 775 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 NRSN1Q8IZ57 195 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 Q96MT0 163 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CCM2Q9BSQ5 444 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CCDC59Q9P031 241 aaKnown RBP17.2■□□□□ 0.34
RAB40C-203ENST00000535977 VPS4AQ9UN37 437 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 PCDHB11Q9Y5F2 797 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 LINC00854A0A1B0GVQ3 168 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 ARHGEF33A8MVX0 844 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 PLK4O00444 970 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CCL16O15467 120 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 PDPK1O15530 556 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 AKR7A2O43488 359 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 FABP3P05413 133 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 FPR1P21462 350 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 WNT3P56703 355 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CXCR4P61073 352 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 FAPQ12884 760 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 SNTA1Q13424 505 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 KEAP1Q14145 624 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 C10orf111Q8N326 155 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 OR56A3Q8NH54 315 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 REPS1Q96D71 796 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 C11orf24Q96F05 449 aaPredicted RBP17.2■□□□□ 0.34
RAB40C-203ENST00000535977 TRNT1Q96Q11 434 aaKnown RBP17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CCDC32Q9BV29 185 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 RIOK2Q9BVS4 552 aaKnown RBP17.2■□□□□ 0.34
RAB40C-203ENST00000535977 RIBC2Q9H4K1 309 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 EPHX3Q9H6B9 360 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 M0R082 166 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 MRPS14O60783 128 aaKnown RBP17.19■□□□□ 0.34
RAB40C-203ENST00000535977 MTX2O75431 263 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 LEFTY1O75610 366 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 ATF4P18848 351 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-203ENST00000535977 PRLHRP49683 370 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 SNRPD2P62316 118 aaKnown RBP17.19■□□□□ 0.34
RAB40C-203ENST00000535977 IL1RL1Q01638 556 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 SPIN4Q56A73 249 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 ZNF805Q5CZA5 627 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 LRRC73Q5JTD7 316 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 ARMC4Q5T2S8 1044 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 AHSA2Q719I0 299 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 CBLL1Q75N03 491 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 CXorf40BQ96DE9 158 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 MARK1Q9P0L2 795 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 STOX2Q9P2F5 926 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-203ENST00000535977 IL36AQ9UHA7 158 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 KLHL20Q9Y2M5 609 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 H3BUI4 141 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 SEMG1P04279 462 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 NAE1Q13564 534 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 ARSIQ5FYB1 569 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 GPR155Q7Z3F1 870 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 TECPR1Q7Z6L1 1165 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 FBXO15Q8NCQ5 510 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-203ENST00000535977 GLYATL1Q969I3 302 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 APOL4Q9BPW4 351 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 DUSP26Q9BV47 211 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 EBPLQ9BY08 206 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 PCDHGB2Q9Y5G2 931 aa17.19■□□□□ 0.34
RAB40C-203ENST00000535977 SLC5A10A0PJK1 596 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 NRG2O14511 850 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-203ENST00000535977 ZNF197O14709 1029 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 SCAMP2O15127 329 aaKnown RBP17.18■□□□□ 0.34
RAB40C-203ENST00000535977 ARHGEF9O43307 516 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 UGT2B17O75795 530 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 CYP7B1O75881 506 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 CD22P20273 847 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 CCR2P41597 374 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 UGT2B15P54855 530 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 ZNF551Q7Z340 670 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-203ENST00000535977 SGK2Q9HBY8 427 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 CCNB1IP1Q9NPC3 277 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 IRAK3Q9Y616 596 aa17.18■□□□□ 0.34
RAB40C-203ENST00000535977 ERP29P30040 261 aaKnown RBP17.18■□□□□ 0.34
RAB40C-203ENST00000535977 KRT20P35900 424 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms