RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 OR5AP2Q8NGF4 316 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 OR10V1Q8NGI7 309 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 OR10G8Q8NGN5 311 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 GPR148Q8TDV2 347 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 AZIN2Q96A70 460 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 C16orf45Q96MC5 204 aaPredicted RBP2.6□□□□□ -1.99
CD44-234ENST00000531873 NECTIN4Q96NY8 510 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 PCDHB18PQ96TA0 734 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 AGPAT1Q99943 283 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 TRPV6Q9H1D0 765 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 CNOT2Q9NZN8 540 aaKnown RBP2.6□□□□□ -1.99
CD44-234ENST00000531873 DBF4Q9UBU7 674 aaPredicted RBP2.6□□□□□ -1.99
CD44-234ENST00000531873 IL20RAQ9UHF4 553 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 PLA2G4CQ9UP65 541 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 MRPS2Q9Y399 296 aaKnown RBP2.6□□□□□ -1.99
CD44-234ENST00000531873 OR1A2Q9Y585 309 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 SH3PXD2BA1X283 911 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 F8WDY8 70 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 ZNF195O14628 629 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 B4GAT1O43505 415 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 LANCL1O43813 399 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 SSX5O60225 188 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 NME2P1O60361 137 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 KRT36O76013 467 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 TXNDC12O95881 172 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 CALCAP01258 141 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 HEXBP07686 556 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 SFTPBP07988 381 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 SERPINF2P08697 491 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 PATE4P0C8F1 98 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 PRSS56P0CW18 603 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 TPBGLP0DKB5 382 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 EZRP15311 586 aaKnown RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 ARF4P18085 180 aaPredicted RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 GPX3P22352 226 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 CTNNA2P26232 953 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 PTPN4P29074 926 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 CCND2P30279 289 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 HSPA1LP34931 641 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 ACAA2P42765 397 aaKnown RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 SLC6A12P48065 614 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 TKTL1P51854 596 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 GEMP55040 296 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 XGP55808 180 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 BACE1P56817 501 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 KCNJ10P78508 379 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 SPP2Q13103 211 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 EFTUD2Q15029 972 aaKnown RBP eCLIP2.59□□□□□ -1.99
CD44-234ENST00000531873 OR1C1Q15619 314 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 INAQ16352 499 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 C3AR1Q16581 482 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 WSCD2Q2TBF2 565 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 ZNF528Q3MIS6 628 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 FAM106AQ4KMX7 169 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 ATP1A1-AS1Q5TC04 95 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 RAET1GQ6H3X3 334 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 SNRNP48Q6IEG0 339 aaKnown RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 CAPN13Q6MZZ7 669 aaPredicted RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 IRGCQ6NXR0 463 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 PSRC1Q6PGN9 363 aaPredicted RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 MEX3BQ6ZN04 569 aaKnown RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 SLC26A9Q7LBE3 791 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 BNIPLQ7Z465 357 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 ADCK1Q86TW2 530 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 SLC22A16Q86VW1 577 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 CATSPERDQ86XM0 798 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 CACUL1Q86Y37 369 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 ARL6IP6Q8N6S5 226 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 CCDC185Q8N715 623 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 RNF148Q8N7C7 305 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 CCDC197Q8NCU1 140 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 SPATA3Q8NHX4 192 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 SMAP2Q8WU79 429 aaPredicted RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 P3H4Q92791 437 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 RAB39BQ96DA2 213 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 CXorf58Q96LI9 332 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 ERGIC2Q96RQ1 377 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 COQ7Q99807 217 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 FTHL17Q9BXU8 183 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 FAM49AQ9H0Q0 323 aaPredicted RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 GANQ9H2C0 597 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 PLEK2Q9NYT0 353 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 TECRQ9NZ01 308 aaKnown RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 ZNF319Q9P2F9 582 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 COPS7AQ9UBW8 275 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 SH3BGRL2Q9UJC5 107 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 TMCC3Q9ULS5 477 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 DIMT1Q9UNQ2 313 aaKnown RBP2.59□□□□□ -1.99
CD44-234ENST00000531873 ANGPTL3Q9Y5C1 460 aa2.59□□□□□ -1.99
CD44-234ENST00000531873 UMODL1Q5DID0 1318 aa2.59□□□□□ -2
CD44-234ENST00000531873 DISP3Q9P2K9 1392 aa2.59□□□□□ -2
CD44-234ENST00000531873 IGHV4-4A0A075B6R2 117 aa2.58□□□□□ -2
CD44-234ENST00000531873 IGKV2D-30A0A075B6S6 120 aa2.58□□□□□ -2
CD44-234ENST00000531873 NKX6-3A6NJ46 265 aa2.58□□□□□ -2
CD44-234ENST00000531873 SHISA7A6NL88 538 aa2.58□□□□□ -2
CD44-234ENST00000531873 PMS2P5A8MQ11 134 aa2.58□□□□□ -2
CD44-234ENST00000531873 SLC1A7O00341 560 aa2.58□□□□□ -2
CD44-234ENST00000531873 EEF2KO00418 725 aaKnown RBP2.58□□□□□ -2
CD44-234ENST00000531873 SIGLEC5O15389 551 aa2.58□□□□□ -2
CD44-234ENST00000531873 GRID2O43424 1007 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms