RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 RENP00797 406 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 EDN1P05305 212 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 GSTT2P0CG29 244 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 MTHFD1P11586 935 aaKnown RBP15.57■□□□□ 0.08
USP42-207ENST00000521713 TARDBPQ13148 414 aaKnown RBP eCLIP15.57■□□□□ 0.084e-6■■□□□ 11.5
USP42-207ENST00000521713 CCINQ13939 588 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 CRTC1Q6UUV9 634 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 NRROSQ86YC3 692 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 TIAM2Q8IVF5 1701 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 INO80EQ8NBZ0 244 aaPredicted RBP15.57■□□□□ 0.08
USP42-207ENST00000521713 OR5AK3PQ8NH89 298 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 MR1Q95460 341 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 TMEM125Q96AQ2 219 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 IL21RQ9HBE5 538 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 MCCC2Q9HCC0 563 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 MAU2Q9Y6X3 613 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 ZNF701M0R085 212 aaPredicted RBP15.57■□□□□ 0.08
USP42-207ENST00000521713 TP73O15350 636 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 HEXBP07686 556 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 ZNF252P-AS1Q0IIN9 211 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 RPA4Q13156 261 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 CEACAM20Q6UY09 585 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 ELMOD2Q8IZ81 293 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 NEK7Q8TDX7 302 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 RFT1Q96AA3 541 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 LIN28AQ9H9Z2 209 aaKnown RBP15.57■□□□□ 0.08
USP42-207ENST00000521713 TPT1P8Q9HAU6 139 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 FARSBQ9NSD9 589 aaKnown RBP15.57■□□□□ 0.08
USP42-207ENST00000521713 KLRF1Q9NZS2 232 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 PCDHGB7Q9Y5F8 929 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 NHSQ6T4R5 1651 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 STATHP02808 62 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 GSTM3P21266 225 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 VSX2P58304 361 aaPredicted RBP15.57■□□□□ 0.08
USP42-207ENST00000521713 DNASE1L3Q13609 305 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 RAB39AQ14964 217 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 LRRC26Q2I0M4 334 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 STEAP4Q687X5 459 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 PLXDC1Q8IUK5 500 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 UBE2J2Q8N2K1 259 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 CMAHPQ9Y471 501 aa15.57■□□□□ 0.08
USP42-207ENST00000521713 PLGP00747 810 aaPredicted RBP15.56■□□□□ 0.08
USP42-207ENST00000521713 HLA-DPB1P04440 258 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 F8A1P23610 371 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 S100A2P29034 98 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ADAM8P78325 824 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 TECRLQ5HYJ1 363 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ZC3H14Q6PJT7 736 aaKnown RBP15.56■□□□□ 0.08
USP42-207ENST00000521713 GPER1Q99527 375 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 C11orf16Q9NQ32 467 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 PRTFDC1Q9NRG1 225 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 AURKAO14965 403 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 RFPL1O75677 317 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 RLN2P04090 185 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ZNF182P17025 639 aaPredicted RBP15.56■□□□□ 0.08
USP42-207ENST00000521713 ITGB7P26010 798 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 RAB41Q5JT25 222 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ALKAL1Q6UXT8 129 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 TMEM17Q86X19 198 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 AKAP1Q92667 903 aaKnown RBP eCLIP15.56■□□□□ 0.08
USP42-207ENST00000521713 CNDP2Q96KP4 475 aaKnown RBP15.56■□□□□ 0.08
USP42-207ENST00000521713 REEP4Q9H6H4 257 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 RANBP3Q9H6Z4 567 aaPredicted RBP15.56■□□□□ 0.08
USP42-207ENST00000521713 CPNE5Q9HCH3 593 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ZNF726A6NNF4 738 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ARSAP15289 507 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 KCNC1P48547 511 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 LINGO2Q7L985 606 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ANKRD13BQ86YJ7 626 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 NR4A3Q92570 626 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 KCNC2Q96PR1 638 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 CCDC106Q9BWC9 280 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ATPIF1Q9UII2 106 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 MYH6P13533 1939 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 IL7P13232 177 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 AFF1P51825 1210 aaKnown RBP15.56■□□□□ 0.08
USP42-207ENST00000521713 ASRGL1Q7L266 308 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 SHKBP1Q8TBC3 707 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ZFP3Q96NJ6 502 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 ZNF717Q9BY31 904 aaPredicted RBP15.56■□□□□ 0.08
USP42-207ENST00000521713 PTGES2Q9H7Z7 377 aa15.56■□□□□ 0.08
USP42-207ENST00000521713 TPST2O60704 377 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 RPS15AP62244 130 aaKnown RBP15.55■□□□□ 0.08
USP42-207ENST00000521713 TBRG1Q3YBR2 411 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 ULK3Q6PHR2 472 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 HHATLQ9HCP6 504 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 RBM7Q9Y580 266 aaKnown RBP15.55■□□□□ 0.08
USP42-207ENST00000521713 KIAA0100Q14667 2235 aaKnown RBP15.55■□□□□ 0.08
USP42-207ENST00000521713 LDB2O43679 373 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 TRIM3O75382 744 aaPredicted RBP15.55■□□□□ 0.08
USP42-207ENST00000521713 GATBO75879 557 aaKnown RBP15.55■□□□□ 0.08
USP42-207ENST00000521713 SOX30O94993 753 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 BCHEP06276 602 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 GABARAPL2P60520 117 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 UFM1P61960 85 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 SPANXN4Q5MJ08 99 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 OGFRL1Q5TC84 451 aaPredicted RBP15.55■□□□□ 0.08
USP42-207ENST00000521713 HLA-CQ95604 372 aa15.55■□□□□ 0.08
USP42-207ENST00000521713 LRCH3Q96II8 777 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms